RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
CAPN3-220ENST00000569827 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
CAPN3-220ENST00000569827 TRPM4Q8TD43 1214 aa15.85■□□□□ 0.13
CAPN3-220ENST00000569827 ABHD8Q96I13 439 aa15.85■□□□□ 0.13
CAPN3-220ENST00000569827 ZNF408Q9H9D4 720 aa15.85■□□□□ 0.13
CAPN3-220ENST00000569827 LAS1LQ9Y4W2 734 aaKnown RBP15.85■□□□□ 0.13
CAPN3-220ENST00000569827 YDJCA8MPS7 323 aa15.84■□□□□ 0.13
CAPN3-220ENST00000569827 CELF2O95319 508 aaKnown RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 MAP2K1Q02750 393 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 MPNDQ8N594 471 aa15.84■□□□□ 0.13
CAPN3-220ENST00000569827 GPR101Q96P66 508 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 ADARB2Q9NS39 739 aaKnown RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
CAPN3-220ENST00000569827 ZNRF3Q9ULT6 936 aa15.84■□□□□ 0.13
CAPN3-220ENST00000569827 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
CAPN3-220ENST00000569827 HIRAP54198 1017 aaPredicted RBP15.83■□□□□ 0.12
CAPN3-220ENST00000569827 GRIPAP1Q4V328 841 aa15.83■□□□□ 0.12
CAPN3-220ENST00000569827 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
CAPN3-220ENST00000569827 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
CAPN3-220ENST00000569827 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
CAPN3-220ENST00000569827 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
CAPN3-220ENST00000569827 CHPF2Q9P2E5 772 aa15.83■□□□□ 0.12
CAPN3-220ENST00000569827 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
CAPN3-220ENST00000569827 KIAA2012Q0VF49 1180 aa15.82■□□□□ 0.12
CAPN3-220ENST00000569827 TCIRG1Q13488 830 aa15.82■□□□□ 0.12
CAPN3-220ENST00000569827 DDX46Q7L014 1031 aaKnown RBP15.82■□□□□ 0.12
CAPN3-220ENST00000569827 SP8Q8IXZ3 490 aa15.82■□□□□ 0.12
CAPN3-220ENST00000569827 RTFDC1Q9BY42 306 aaPredicted RBP15.82■□□□□ 0.12
CAPN3-220ENST00000569827 ATP5J2-PTCD1G3V325 749 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 RIMBP2O15034 1052 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 ECE1P42892 770 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 GRAPQ13588 217 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 PSME4Q14997 1843 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 SUPT20HQ8NEM7 779 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 GRAPLQ8TC17 118 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-220ENST00000569827 SH3TC1Q8TE82 1336 aa15.81■□□□□ 0.12
CAPN3-220ENST00000569827 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-220ENST00000569827 BBOX1O75936 387 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
CAPN3-220ENST00000569827 ZIC5Q96T25 663 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 BEGAINQ9BUH8 593 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 DBNDD1Q9H9R9 158 aa15.8■□□□□ 0.12
CAPN3-220ENST00000569827 MYH3P11055 1940 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 EGFRP00533 1210 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 SAMD7Q7Z3H4 446 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 MICALL2Q8IY33 904 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 KCNQ5Q9NR82 932 aa15.79■□□□□ 0.12
CAPN3-220ENST00000569827 CNOT7Q9UIV1 285 aaKnown RBP15.79■□□□□ 0.12
CAPN3-220ENST00000569827 CCDC85CA6NKD9 419 aa15.78■□□□□ 0.12
CAPN3-220ENST00000569827 USP48Q86UV5 1035 aa15.78■□□□□ 0.12
CAPN3-220ENST00000569827 TRIM35Q9UPQ4 493 aa15.78■□□□□ 0.12
CAPN3-220ENST00000569827 PSMD14O00487 310 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 CHL1O00533 1208 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 LMOD3Q0VAK6 560 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 DOK7Q18PE1 504 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.12
CAPN3-220ENST00000569827 HDGFL1Q5TGJ6 251 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 VPS33BQ9H267 617 aa15.77■□□□□ 0.12
CAPN3-220ENST00000569827 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.12
CAPN3-220ENST00000569827 GPSM2P81274 684 aa15.76■□□□□ 0.11
CAPN3-220ENST00000569827 TNIP1Q15025 636 aa15.76■□□□□ 0.11
CAPN3-220ENST00000569827 RBM26Q5T8P6 1007 aaKnown RBP15.76■□□□□ 0.11
CAPN3-220ENST00000569827 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
CAPN3-220ENST00000569827 POLLQ9UGP5 575 aa15.76■□□□□ 0.11
CAPN3-220ENST00000569827 TNRC18O15417 2968 aaPredicted RBP15.76■□□□□ 0.11
CAPN3-220ENST00000569827 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 ADM5C9JUS6 153 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 C6orf229H3BNL8 230 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
CAPN3-220ENST00000569827 PLBD2Q8NHP8 589 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 JARID2Q92833 1246 aaPredicted RBP15.75■□□□□ 0.11
CAPN3-220ENST00000569827 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 PGAP2Q9UHJ9 254 aa15.75■□□□□ 0.11
CAPN3-220ENST00000569827 ZNF646O15015 1829 aaPredicted RBP15.75■□□□□ 0.11
CAPN3-220ENST00000569827 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-220ENST00000569827 CDHR2Q9BYE9 1310 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 H7C1D1 291 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 ECE2O60344 883 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 RALBP1Q15311 655 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 WASHC4Q2M389 1173 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 PDE4DIPQ5VU43 2346 aa15.74■□□□□ 0.11
CAPN3-220ENST00000569827 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
CAPN3-220ENST00000569827 MAP2K2P36507 400 aa15.73■□□□□ 0.11
CAPN3-220ENST00000569827 HUNKP57058 714 aa15.73■□□□□ 0.11
CAPN3-220ENST00000569827 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
CAPN3-220ENST00000569827 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
CAPN3-220ENST00000569827 CCDC85AQ96PX6 553 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-220ENST00000569827 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
CAPN3-220ENST00000569827 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-220ENST00000569827 SF3B3Q15393 1217 aaKnown RBP15.72■□□□□ 0.11
CAPN3-220ENST00000569827 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
CAPN3-220ENST00000569827 MCOLN1Q9GZU1 580 aa15.72■□□□□ 0.11
CAPN3-220ENST00000569827 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms