RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CCDC57Q2TAC2 916 aa13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
PDXDC1-216ENST00000569715 TNNI3KQ59H18 835 aa13.4□□□□□ -0.27
PDXDC1-216ENST00000569715 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.27
PDXDC1-216ENST00000569715 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.27
PDXDC1-216ENST00000569715 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 EYA2O00167 538 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 RXRBP28702 533 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 ECHDC1Q9NTX5 307 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 PDE8AO60658 829 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 TBC1D9BQ66K14 1250 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 ITGA6P23229 1130 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 POTEAQ6S8J7 498 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
PDXDC1-216ENST00000569715 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-216ENST00000569715 COL24A1Q17RW2 1714 aa13.38□□□□□ -0.27
PDXDC1-216ENST00000569715 AK7Q96M32 723 aa13.38□□□□□ -0.27
PDXDC1-216ENST00000569715 SPEF2Q9C093 1822 aa13.38□□□□□ -0.27
PDXDC1-216ENST00000569715 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 COL4A1P02462 1669 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 PROM2Q8N271 834 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 CIAO1O76071 339 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 LRP5O75197 1615 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 ZNF609O15014 1411 aa13.37□□□□□ -0.27
PDXDC1-216ENST00000569715 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 ZPR1O75312 459 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 TAF7LQ5H9L4 462 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 ERC2O15083 957 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 CHMLP26374 656 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
PDXDC1-216ENST00000569715 IL25Q9H293 177 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 TAF1P21675 1872 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 ANKRD18BA2A2Z9 1011 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 TIMM10P62072 90 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 ABCC12Q96J65 1359 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 TXNRD1Q16881 649 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
PDXDC1-216ENST00000569715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 RFC4P35249 363 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
PDXDC1-216ENST00000569715 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.27
PDXDC1-216ENST00000569715 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.27
PDXDC1-216ENST00000569715 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.27
PDXDC1-216ENST00000569715 RGL2O15211 777 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 A0A1B0GUL7 405 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 APBA3O96018 575 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
PDXDC1-216ENST00000569715 SETDB2Q96T68 719 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 ADORA1P30542 326 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 KIF2CQ99661 725 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-216ENST00000569715 ATP5JP18859 108 aa13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 METTL24Q5JXM2 366 aa13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
PDXDC1-216ENST00000569715 ADRA2BP18089 450 aa13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 NFIXQ14938 502 aa13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 EVI5LQ96CN4 794 aa13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-216ENST00000569715 PLSCR1O15162 318 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 REC8O95072 547 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 GYS1P13807 737 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 SSFA2P28290 1259 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms