RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
CNEP1R1-211ENST00000569647 C3orf67Q6ZVT6 689 aa16.31■□□□□ 0.2
CNEP1R1-211ENST00000569647 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
CNEP1R1-211ENST00000569647 RRAGCQ9HB90 399 aa16.31■□□□□ 0.2
CNEP1R1-211ENST00000569647 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
CNEP1R1-211ENST00000569647 HSPA6P17066 643 aa16.3■□□□□ 0.2
CNEP1R1-211ENST00000569647 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
CNEP1R1-211ENST00000569647 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
CNEP1R1-211ENST00000569647 ALDH1L1O75891 902 aa16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
CNEP1R1-211ENST00000569647 GCKRQ14397 625 aa16.28■□□□□ 0.2
CNEP1R1-211ENST00000569647 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
CNEP1R1-211ENST00000569647 RBM46Q8TBY0 533 aaKnown RBP16.28■□□□□ 0.2
CNEP1R1-211ENST00000569647 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
CNEP1R1-211ENST00000569647 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
CNEP1R1-211ENST00000569647 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 PCCAP05165 728 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 RLBP1P12271 317 aa16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 ZBTB38Q8NAP3 1195 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.2
CNEP1R1-211ENST00000569647 MYH3P11055 1940 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 H7C1W4 665 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 PLIN1O60240 522 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 CASP7P55210 303 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 FAM89AQ96GI7 184 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 SCN4AP35499 1836 aa16.26■□□□□ 0.19
CNEP1R1-211ENST00000569647 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 POTECB2RU33 542 aa16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 PSMD1Q99460 953 aa16.25■□□□□ 0.19
CNEP1R1-211ENST00000569647 UTYO14607 1347 aa16.24■□□□□ 0.19
CNEP1R1-211ENST00000569647 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
CNEP1R1-211ENST00000569647 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
CNEP1R1-211ENST00000569647 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
CNEP1R1-211ENST00000569647 GRM8O00222 908 aa16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 FSTL1Q12841 308 aa16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 COL4A5P29400 1685 aa16.23■□□□□ 0.19
CNEP1R1-211ENST00000569647 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 MS4A1P11836 297 aa16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 PDE3AQ14432 1141 aa16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 GRIPAP1Q4V328 841 aa16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
CNEP1R1-211ENST00000569647 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
CNEP1R1-211ENST00000569647 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
CNEP1R1-211ENST00000569647 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
CNEP1R1-211ENST00000569647 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
CNEP1R1-211ENST00000569647 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.19
CNEP1R1-211ENST00000569647 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 FZD9O00144 591 aa16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 APLP1P51693 650 aa16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 MEIS3Q99687 375 aa16.2■□□□□ 0.18
CNEP1R1-211ENST00000569647 COL4A1P02462 1669 aa16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 PDE8AO60658 829 aa16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 BBOX1O75936 387 aa16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 GRAPQ13588 217 aa16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
CNEP1R1-211ENST00000569647 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 JDP2Q8WYK2 163 aa16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
CNEP1R1-211ENST00000569647 CTSWP56202 376 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 FOXO4P98177 505 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
CNEP1R1-211ENST00000569647 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
CNEP1R1-211ENST00000569647 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms