RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ZNF772Q68DY9 489 aaPredicted RBP27.52■■■□□ 2
VCPKMT-205ENST00000569518 GPR108Q9NPR9 543 aa27.52■■■□□ 2
VCPKMT-205ENST00000569518 DBNLQ9UJU6 430 aaKnown RBP27.52■■■□□ 2
VCPKMT-205ENST00000569518 CNTROBQ8N137 903 aa27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 ESYT1Q9BSJ8 1104 aa27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 UTP14AQ9BVJ6 771 aaKnown RBP27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 USP26Q9BXU7 913 aa27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 SH3TC1Q8TE82 1336 aa27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 MAP4K4O95819 1239 aaPredicted RBP27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 NIP7Q9Y221 180 aaKnown RBP eCLIP27.51■■□□□ 1.99
VCPKMT-205ENST00000569518 REC8O95072 547 aa27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 NTSR2O95665 410 aa27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 IFIT5Q13325 482 aaKnown RBP27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 KIF2CQ99661 725 aa27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 PUS3Q9BZE2 481 aaKnown RBP27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 LRP5O75197 1615 aa27.5■■□□□ 1.99
VCPKMT-205ENST00000569518 ZNF609O15014 1411 aa27.49■■□□□ 1.99
VCPKMT-205ENST00000569518 RBM6P78332 1123 aaKnown RBP27.49■■□□□ 1.99
VCPKMT-205ENST00000569518 GREM2Q9H772 168 aa27.49■■□□□ 1.99
VCPKMT-205ENST00000569518 CCDC85AQ96PX6 553 aaPredicted RBP27.48■■□□□ 1.99
VCPKMT-205ENST00000569518 GNPATO15228 680 aa27.48■■□□□ 1.99
VCPKMT-205ENST00000569518 C4AP0C0L4 1744 aa27.48■■□□□ 1.99
VCPKMT-205ENST00000569518 ITGA6P23229 1130 aa27.47■■□□□ 1.99
VCPKMT-205ENST00000569518 BCL2L12Q9HB09 334 aa27.47■■□□□ 1.99
VCPKMT-205ENST00000569518 NARFQ9UHQ1 456 aa27.47■■□□□ 1.99
VCPKMT-205ENST00000569518 COL24A1Q17RW2 1714 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 SLC4A3P48751 1232 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 SMIM5Q71RC9 77 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 AMIGO3Q86WK7 504 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 EVI5LQ96CN4 794 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 DBNDD2Q9BQY9 259 aa27.46■■□□□ 1.99
VCPKMT-205ENST00000569518 RIC1Q4ADV7 1423 aa27.45■■□□□ 1.99
VCPKMT-205ENST00000569518 ATP5JP18859 108 aa27.45■■□□□ 1.98
VCPKMT-205ENST00000569518 LRRC4BQ9NT99 713 aa27.45■■□□□ 1.98
VCPKMT-205ENST00000569518 EP400Q96L91 3159 aa27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 BECN1Q14457 450 aa27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 RTCBQ9Y3I0 505 aaKnown RBP27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 ANKRD18BA2A2Z9 1011 aa27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 HCLS1P14317 486 aaPredicted RBP27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 TAF7LQ5H9L4 462 aa27.44■■□□□ 1.98
VCPKMT-205ENST00000569518 RTL9Q8NET4 1388 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 TBC1D2Q9BYX2 928 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 IL25Q9H293 177 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 CEP126Q9P2H0 1117 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 DAXXQ9UER7 740 aaPredicted RBP27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 RIPOR2Q9Y4F9 1068 aa27.42■■□□□ 1.98
VCPKMT-205ENST00000569518 USPL1Q5W0Q7 1092 aa27.41■■□□□ 1.98
VCPKMT-205ENST00000569518 BOLA2Q9H3K6 86 aa27.41■■□□□ 1.98
VCPKMT-205ENST00000569518 UBR3Q6ZT12 1888 aa27.41■■□□□ 1.98
VCPKMT-205ENST00000569518 HSP90B1P14625 803 aaKnown RBP27.41■■□□□ 1.98
VCPKMT-205ENST00000569518 SRP68Q9UHB9 627 aaKnown RBP27.41■■□□□ 1.98
VCPKMT-205ENST00000569518 TRIM37O94972 964 aa27.4■■□□□ 1.98
VCPKMT-205ENST00000569518 TBC1D9BQ66K14 1250 aa27.4■■□□□ 1.98
VCPKMT-205ENST00000569518 ERICH6Q7L0X2 663 aa27.4■■□□□ 1.98
VCPKMT-205ENST00000569518 CASZ1Q86V15 1759 aa27.4■■□□□ 1.98
VCPKMT-205ENST00000569518 A0A1B0GUL7 405 aa27.39■■□□□ 1.98
VCPKMT-205ENST00000569518 SGSM2O43147 1006 aa27.39■■□□□ 1.98
VCPKMT-205ENST00000569518 TIMM10P62072 90 aa27.39■■□□□ 1.98
VCPKMT-205ENST00000569518 SLC27A3Q5K4L6 730 aa27.39■■□□□ 1.98
VCPKMT-205ENST00000569518 ARHGEF1Q92888 912 aaKnown RBP27.39■■□□□ 1.98
VCPKMT-205ENST00000569518 EPB41L2O43491 1005 aaKnown RBP27.39■■□□□ 1.97
VCPKMT-205ENST00000569518 LDHAL6AQ6ZMR3 332 aa27.39■■□□□ 1.97
VCPKMT-205ENST00000569518 ZPR1O75312 459 aa27.38■■□□□ 1.97
VCPKMT-205ENST00000569518 AKAP2Q9Y2D5 859 aa27.38■■□□□ 1.97
VCPKMT-205ENST00000569518 NEUROD6Q96NK8 337 aa27.37■■□□□ 1.97
VCPKMT-205ENST00000569518 HAUS7Q99871 368 aa27.37■■□□□ 1.97
VCPKMT-205ENST00000569518 VGLL2Q8N8G2 317 aa27.37■■□□□ 1.97
VCPKMT-205ENST00000569518 SNX21Q969T3 373 aa27.37■■□□□ 1.97
VCPKMT-205ENST00000569518 ANO2Q9NQ90 1003 aa27.36■■□□□ 1.97
VCPKMT-205ENST00000569518 DIAPH3Q9NSV4 1193 aa27.36■■□□□ 1.97
VCPKMT-205ENST00000569518 ERFEQ4G0M1 354 aa27.35■■□□□ 1.97
VCPKMT-205ENST00000569518 CCDC152Q4G0S7 254 aa27.35■■□□□ 1.97
VCPKMT-205ENST00000569518 ADRA2BP18089 450 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 CNNM1Q9NRU3 951 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 HIP1O00291 1037 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 METTL24Q5JXM2 366 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 TRAPPC3LQ5T215 181 aa27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 CWC27Q6UX04 472 aaKnown RBP27.34■■□□□ 1.97
VCPKMT-205ENST00000569518 SPEF2Q9C093 1822 aa27.33■■□□□ 1.97
VCPKMT-205ENST00000569518 SLC10A5Q5PT55 438 aa27.33■■□□□ 1.97
VCPKMT-205ENST00000569518 BICDL1Q6ZP65 573 aa27.33■■□□□ 1.97
VCPKMT-205ENST00000569518 ABCC12Q96J65 1359 aa27.33■■□□□ 1.96
VCPKMT-205ENST00000569518 RABEP1Q15276 862 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 RUFY2Q8WXA3 655 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 EDC3Q96F86 508 aaKnown RBP27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 SETDB2Q96T68 719 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 SEC31BQ9NQW1 1179 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 ARAP2Q8WZ64 1704 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 RXRBP28702 533 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 RFC4P35249 363 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 IL17RAQ96F46 866 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 FSD1Q9BTV5 496 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 SNRKQ9NRH2 765 aa27.32■■□□□ 1.96
VCPKMT-205ENST00000569518 COL4A1P02462 1669 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 PHF14O94880 888 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 ADORA1P30542 326 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 SF3B3Q15393 1217 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms