RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 GRAPQ13588 217 aa11.94□□□□□ -0.5
UBR1-210ENST00000569337 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 GRAPLQ8TC17 118 aaPredicted RBP11.94□□□□□ -0.5
UBR1-210ENST00000569337 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
UBR1-210ENST00000569337 SMC4Q9NTJ3 1288 aa11.94□□□□□ -0.5
UBR1-210ENST00000569337 IGKV5-2P06315 115 aa11.93□□□□□ -0.5
UBR1-210ENST00000569337 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
UBR1-210ENST00000569337 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
UBR1-210ENST00000569337 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
UBR1-210ENST00000569337 PLIN1O60240 522 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 PDE8AO60658 829 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
UBR1-210ENST00000569337 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
UBR1-210ENST00000569337 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
UBR1-210ENST00000569337 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 MPNDQ8N594 471 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
UBR1-210ENST00000569337 NOB1Q9ULX3 412 aaKnown RBP11.92□□□□□ -0.5
UBR1-210ENST00000569337 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
UBR1-210ENST00000569337 NEURL1BA8MQ27 555 aa11.91□□□□□ -0.5
UBR1-210ENST00000569337 CWF19L2Q2TBE0 894 aaKnown RBP11.91□□□□□ -0.5
UBR1-210ENST00000569337 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
UBR1-210ENST00000569337 SLC51AQ86UW1 340 aa11.91□□□□□ -0.5
UBR1-210ENST00000569337 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
UBR1-210ENST00000569337 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
UBR1-210ENST00000569337 SUPT16HQ9Y5B9 1047 aaKnown RBP11.91□□□□□ -0.5
UBR1-210ENST00000569337 ARFGEF2Q9Y6D5 1785 aa11.91□□□□□ -0.5
UBR1-210ENST00000569337 FZD9O00144 591 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 SBF1O95248 1867 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 HSPA6P17066 643 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 EIF6P56537 245 aaKnown RBP11.9□□□□□ -0.5
UBR1-210ENST00000569337 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
UBR1-210ENST00000569337 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
UBR1-210ENST00000569337 SNED1Q8TER0 1413 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
UBR1-210ENST00000569337 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 FER1L6Q2WGJ9 1857 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 POTECB2RU33 542 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 F6X3S4 739 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 FSTL1Q12841 308 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 AOC3Q16853 763 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 LINS1Q8NG48 757 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 FRAT1Q92837 279 aaPredicted RBP11.89□□□□□ -0.51
UBR1-210ENST00000569337 CCDC85AQ96PX6 553 aaPredicted RBP11.89□□□□□ -0.51
UBR1-210ENST00000569337 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
UBR1-210ENST00000569337 SEC31BQ9NQW1 1179 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
UBR1-210ENST00000569337 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 H7C1W4 665 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 RLBP1P12271 317 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 TRIM27P14373 513 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 RRP1P56182 461 aaKnown RBP11.88□□□□□ -0.51
UBR1-210ENST00000569337 CTSWP56202 376 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 GCKRQ14397 625 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 UBE3BQ7Z3V4 1068 aa11.88□□□□□ -0.51
UBR1-210ENST00000569337 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
UBR1-210ENST00000569337 PTPRCP08575 1304 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 C20orf194Q5TEA3 1177 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 GPC2Q8N158 579 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 ARHGAP45Q92619 1136 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
UBR1-210ENST00000569337 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
UBR1-210ENST00000569337 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 ZKSCAN2Q63HK3 967 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 SLC4A10Q6U841 1118 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 ATF7IPQ6VMQ6 1270 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 ANKRD18AQ8IVF6 992 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 CDC5LQ99459 802 aaKnown RBP11.86□□□□□ -0.51
UBR1-210ENST00000569337 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 ZNRF3Q9ULT6 936 aa11.86□□□□□ -0.51
UBR1-210ENST00000569337 APLP1P51693 650 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 GPSM2P81274 684 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 PANK1Q8TE04 598 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 EYA3Q99504 573 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 TAF1DQ9H5J8 278 aaPredicted RBP11.85□□□□□ -0.51
UBR1-210ENST00000569337 ANKIB1Q9P2G1 1089 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
UBR1-210ENST00000569337 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
UBR1-210ENST00000569337 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
UBR1-210ENST00000569337 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
UBR1-210ENST00000569337 EAPPQ56P03 285 aaPredicted RBP11.84□□□□□ -0.51
UBR1-210ENST00000569337 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
UBR1-210ENST00000569337 API5Q9BZZ5 524 aaKnown RBP11.84□□□□□ -0.51
UBR1-210ENST00000569337 SRCIN1Q9C0H9 1055 aa11.84□□□□□ -0.51
UBR1-210ENST00000569337 GREM2Q9H772 168 aa11.84□□□□□ -0.51
UBR1-210ENST00000569337 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms