RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HSPA1AP0DMV8 641 aaKnown RBP20.17■□□□□ 0.82
USB1-215ENST00000569252 HSPA1BP0DMV9 641 aaKnown RBP20.17■□□□□ 0.82
USB1-215ENST00000569252 PRR5LQ6MZQ0 368 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 TNS4Q8IZW8 715 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
USB1-215ENST00000569252 NUP98P52948 1817 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 ABCC4O15439 1325 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
USB1-215ENST00000569252 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
USB1-215ENST00000569252 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
USB1-215ENST00000569252 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
USB1-215ENST00000569252 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
USB1-215ENST00000569252 PCCAP05165 728 aaPredicted RBP20.15■□□□□ 0.82
USB1-215ENST00000569252 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
USB1-215ENST00000569252 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
USB1-215ENST00000569252 FER1L6Q2WGJ9 1857 aa20.15■□□□□ 0.82
USB1-215ENST00000569252 ARFGEF2Q9Y6D5 1785 aa20.14■□□□□ 0.81
USB1-215ENST00000569252 GRM8O00222 908 aa20.14■□□□□ 0.81
USB1-215ENST00000569252 GNAI3P08754 354 aa20.14■□□□□ 0.81
USB1-215ENST00000569252 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.81
USB1-215ENST00000569252 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
USB1-215ENST00000569252 NTSR2O95665 410 aa20.13■□□□□ 0.81
USB1-215ENST00000569252 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
USB1-215ENST00000569252 NLRP3Q96P20 1036 aa20.13■□□□□ 0.81
USB1-215ENST00000569252 IBTKQ9P2D0 1353 aaPredicted RBP20.12■□□□□ 0.81
USB1-215ENST00000569252 H7C1W4 665 aa20.12■□□□□ 0.81
USB1-215ENST00000569252 IRS4O14654 1257 aaPredicted RBP20.12■□□□□ 0.81
USB1-215ENST00000569252 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
USB1-215ENST00000569252 PDE6BP35913 854 aa20.12■□□□□ 0.81
USB1-215ENST00000569252 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
USB1-215ENST00000569252 MKRN1Q9UHC7 482 aaKnown RBP20.12■□□□□ 0.81
USB1-215ENST00000569252 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
USB1-215ENST00000569252 COG6Q9Y2V7 657 aa20.12■□□□□ 0.81
USB1-215ENST00000569252 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
USB1-215ENST00000569252 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
USB1-215ENST00000569252 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
USB1-215ENST00000569252 OLFM4Q6UX06 510 aa20.11■□□□□ 0.81
USB1-215ENST00000569252 JARID2Q92833 1246 aaPredicted RBP20.11■□□□□ 0.81
USB1-215ENST00000569252 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
USB1-215ENST00000569252 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
USB1-215ENST00000569252 DICER1Q9UPY3 1922 aaKnown RBP20.11■□□□□ 0.81
USB1-215ENST00000569252 RLBP1P12271 317 aa20.1■□□□□ 0.81
USB1-215ENST00000569252 SLC10A5Q5PT55 438 aa20.1■□□□□ 0.81
USB1-215ENST00000569252 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
USB1-215ENST00000569252 PDE8AO60658 829 aa20.09■□□□□ 0.81
USB1-215ENST00000569252 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
USB1-215ENST00000569252 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
USB1-215ENST00000569252 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.81
USB1-215ENST00000569252 NEFLP07196 543 aa20.08■□□□□ 0.81
USB1-215ENST00000569252 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
USB1-215ENST00000569252 ANKRD36CQ5JPF3 1778 aa20.08■□□□□ 0.8
USB1-215ENST00000569252 GNAI2P04899 355 aa20.07■□□□□ 0.8
USB1-215ENST00000569252 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
USB1-215ENST00000569252 SYNE4Q8N205 404 aa20.07■□□□□ 0.8
USB1-215ENST00000569252 UTYO14607 1347 aa20.06■□□□□ 0.8
USB1-215ENST00000569252 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
USB1-215ENST00000569252 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
USB1-215ENST00000569252 RPGRQ92834 1020 aaKnown RBP20.06■□□□□ 0.8
USB1-215ENST00000569252 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
USB1-215ENST00000569252 CCDC152Q4G0S7 254 aa20.05■□□□□ 0.8
USB1-215ENST00000569252 MEIS3Q99687 375 aa20.05■□□□□ 0.8
USB1-215ENST00000569252 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
USB1-215ENST00000569252 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
USB1-215ENST00000569252 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
USB1-215ENST00000569252 PLA2G12BQ9BX93 195 aa20.04■□□□□ 0.8
USB1-215ENST00000569252 ZNF541Q9H0D2 1346 aa20.03■□□□□ 0.8
USB1-215ENST00000569252 SRGNP10124 158 aa20.03■□□□□ 0.8
USB1-215ENST00000569252 CASP7P55210 303 aa20.03■□□□□ 0.8
USB1-215ENST00000569252 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
USB1-215ENST00000569252 DDX46Q7L014 1031 aaKnown RBP20.03■□□□□ 0.8
USB1-215ENST00000569252 SUCLG2Q96I99 432 aa20.03■□□□□ 0.8
USB1-215ENST00000569252 ALDH1B1P30837 517 aa20.02■□□□□ 0.8
USB1-215ENST00000569252 CTSWP56202 376 aa20.02■□□□□ 0.8
USB1-215ENST00000569252 CRBNQ96SW2 442 aa20.02■□□□□ 0.8
USB1-215ENST00000569252 ZNF277Q9NRM2 450 aaPredicted RBP20.02■□□□□ 0.8
USB1-215ENST00000569252 LRRFIP2Q9Y608 721 aaKnown RBP20.02■□□□□ 0.8
USB1-215ENST00000569252 NPR1P16066 1061 aa20.01■□□□□ 0.79
USB1-215ENST00000569252 AAMPQ13685 434 aa20.01■□□□□ 0.79
USB1-215ENST00000569252 SF3B3Q15393 1217 aaKnown RBP20.01■□□□□ 0.79
USB1-215ENST00000569252 CCDC57Q2TAC2 916 aa20.01■□□□□ 0.79
USB1-215ENST00000569252 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
USB1-215ENST00000569252 MASTLQ96GX5 879 aa20.01■□□□□ 0.79
USB1-215ENST00000569252 TMX4Q9H1E5 349 aaPredicted RBP20.01■□□□□ 0.79
USB1-215ENST00000569252 ABCC12Q96J65 1359 aa20■□□□□ 0.79
USB1-215ENST00000569252 FOXN1O15353 648 aa20■□□□□ 0.79
USB1-215ENST00000569252 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
USB1-215ENST00000569252 IFIT5Q13325 482 aaKnown RBP20■□□□□ 0.79
USB1-215ENST00000569252 TAF7LQ5H9L4 462 aa20■□□□□ 0.79
USB1-215ENST00000569252 STYK1Q6J9G0 422 aa20■□□□□ 0.79
USB1-215ENST00000569252 TTLL11Q8NHH1 800 aa20■□□□□ 0.79
USB1-215ENST00000569252 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
USB1-215ENST00000569252 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
USB1-215ENST00000569252 KLRG2A4D1S0 409 aaPredicted RBP19.99■□□□□ 0.79
USB1-215ENST00000569252 FOXO4P98177 505 aa19.99■□□□□ 0.79
USB1-215ENST00000569252 C7orf43Q8WVR3 580 aa19.99■□□□□ 0.79
USB1-215ENST00000569252 CNKSR1Q969H4 720 aa19.99■□□□□ 0.79
USB1-215ENST00000569252 ZBTB40Q9NUA8 1239 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms