RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MPNDQ8N594 471 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 ZNF408Q9H9D4 720 aa15.58■□□□□ 0.08
GTF3C1-209ENST00000568569 RAD17O75943 681 aa15.57■□□□□ 0.08
GTF3C1-209ENST00000568569 NOGQ13253 232 aa15.57■□□□□ 0.08
GTF3C1-209ENST00000568569 NFE2L2Q16236 605 aa15.57■□□□□ 0.08
GTF3C1-209ENST00000568569 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
GTF3C1-209ENST00000568569 HIRAP54198 1017 aaPredicted RBP15.56■□□□□ 0.08
GTF3C1-209ENST00000568569 TRPM4Q8TD43 1214 aa15.56■□□□□ 0.08
GTF3C1-209ENST00000568569 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
GTF3C1-209ENST00000568569 H7C1D1 291 aa15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 DGKZQ13574 1117 aa15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 HSP90AB3PQ58FF7 597 aa15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 DDX46Q7L014 1031 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 CNOT7Q9UIV1 285 aaKnown RBP15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
GTF3C1-209ENST00000568569 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 HUNKP57058 714 aa15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 GRAPQ13588 217 aa15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 PDIA6Q15084 440 aa15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 GRAPLQ8TC17 118 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-209ENST00000568569 YDJCA8MPS7 323 aa15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 HCLS1P14317 486 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 NLRP10Q86W26 655 aa15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 MICALL2Q8IY33 904 aa15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-209ENST00000568569 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 SHTN1A0MZ66 631 aa15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 USP48Q86UV5 1035 aa15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 DPF2Q92785 391 aa15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 PCDH10Q9P2E7 1040 aa15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 TRMT112Q9UI30 125 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-209ENST00000568569 ANXA1P04083 346 aa15.51■□□□□ 0.07
GTF3C1-209ENST00000568569 ZIC5Q96T25 663 aa15.51■□□□□ 0.07
GTF3C1-209ENST00000568569 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 RGMBQ6NW40 437 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 KRT26Q7Z3Y9 468 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 BABAM1Q9NWV8 329 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 SAGE1Q9NXZ1 904 aa15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-209ENST00000568569 PSMD14O00487 310 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 AIMP1Q12904 312 aaKnown RBP15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 C2orf69Q8N8R5 385 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 XAGE3Q8WTP9 111 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 GBA2Q9HCG7 927 aaPredicted RBP15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 DUOX1Q9NRD9 1551 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 DLG5Q8TDM6 1919 aa15.49■□□□□ 0.07
GTF3C1-209ENST00000568569 FAM155AB1AL88 458 aaPredicted RBP15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 RPS12P25398 132 aaKnown RBP15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 TBC1D10BQ4KMP7 808 aaPredicted RBP15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 DBNDD1Q9H9R9 158 aa15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 PDE4DIPQ5VU43 2346 aa15.48■□□□□ 0.07
GTF3C1-209ENST00000568569 DLK2Q6UY11 383 aa15.47■□□□□ 0.07
GTF3C1-209ENST00000568569 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
GTF3C1-209ENST00000568569 DCPSQ96C86 337 aaKnown RBP15.47■□□□□ 0.07
GTF3C1-209ENST00000568569 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
GTF3C1-209ENST00000568569 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
GTF3C1-209ENST00000568569 EGFRP00533 1210 aa15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 ZNF157P51786 506 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 RIPK4P57078 832 aa15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
GTF3C1-209ENST00000568569 ADM5C9JUS6 153 aa15.45■□□□□ 0.06
GTF3C1-209ENST00000568569 C6orf229H3BNL8 230 aa15.45■□□□□ 0.06
GTF3C1-209ENST00000568569 SULF1Q8IWU6 871 aa15.45■□□□□ 0.06
GTF3C1-209ENST00000568569 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
GTF3C1-209ENST00000568569 EYA3Q99504 573 aa15.45■□□□□ 0.06
GTF3C1-209ENST00000568569 LRRC37AA6NMS7 1700 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 ECE2O60344 883 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 SF3B3Q15393 1217 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 KIF4BQ2VIQ3 1234 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 POLLQ9UGP5 575 aa15.44■□□□□ 0.06
GTF3C1-209ENST00000568569 TRPA1O75762 1119 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 SLC10A3P09131 477 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 GPSM2P81274 684 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 GGA3Q9NZ52 723 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 CHPF2Q9P2E5 772 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 LAMB2P55268 1798 aa15.43■□□□□ 0.06
GTF3C1-209ENST00000568569 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
GTF3C1-209ENST00000568569 SOX10P56693 466 aa15.42■□□□□ 0.06
GTF3C1-209ENST00000568569 DOK7Q18PE1 504 aa15.42■□□□□ 0.06
GTF3C1-209ENST00000568569 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
GTF3C1-209ENST00000568569 ISCA1Q9BUE6 129 aa15.42■□□□□ 0.06
GTF3C1-209ENST00000568569 KCNQ5Q9NR82 932 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms