RNA–Protein interactions for RNA: ENST00000568176.5

EDC3-214, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-214ENST00000568176 PTPN12Q05209 780 aaKnown RBP23.06■■□□□ 1.28
EDC3-214ENST00000568176 ANKRD45Q5TZF3 282 aa23.06■■□□□ 1.28
EDC3-214ENST00000568176 NYXQ9GZU5 481 aa23.06■■□□□ 1.28
EDC3-214ENST00000568176 GREM2Q9H772 168 aa23.06■■□□□ 1.28
EDC3-214ENST00000568176 TNRC6CQ9HCJ0 1690 aaKnown RBP23.06■■□□□ 1.28
EDC3-214ENST00000568176 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
EDC3-214ENST00000568176 NOP58Q9Y2X3 529 aaKnown RBP23.05■■□□□ 1.28
EDC3-214ENST00000568176 COL4A1P02462 1669 aa23.05■■□□□ 1.28
EDC3-214ENST00000568176 SLC10A5Q5PT55 438 aa23.05■■□□□ 1.28
EDC3-214ENST00000568176 TPTE2Q6XPS3 522 aa23.05■■□□□ 1.28
EDC3-214ENST00000568176 ZNF594Q96JF6 807 aaPredicted RBP23.05■■□□□ 1.28
EDC3-214ENST00000568176 LNPKQ9C0E8 428 aa23.05■■□□□ 1.28
EDC3-214ENST00000568176 SERPINB2P05120 415 aa23.04■■□□□ 1.28
EDC3-214ENST00000568176 PDE4AP27815 886 aa23.04■■□□□ 1.28
EDC3-214ENST00000568176 PRR5LQ6MZQ0 368 aa23.04■■□□□ 1.28
EDC3-214ENST00000568176 NLGN1Q8N2Q7 840 aa23.04■■□□□ 1.28
EDC3-214ENST00000568176 SIL1Q9H173 461 aa23.04■■□□□ 1.28
EDC3-214ENST00000568176 GTF2E1P29083 439 aaPredicted RBP23.03■■□□□ 1.28
EDC3-214ENST00000568176 CHD1LQ86WJ1 897 aa23.03■■□□□ 1.28
EDC3-214ENST00000568176 COPRSQ9NQ92 184 aa23.03■■□□□ 1.28
EDC3-214ENST00000568176 TSHZ2Q9NRE2 1034 aa23.03■■□□□ 1.28
EDC3-214ENST00000568176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.03■■□□□ 1.28
EDC3-214ENST00000568176 TAF1P21675 1872 aa23.03■■□□□ 1.28
EDC3-214ENST00000568176 NRXN2Q9P2S2 1712 aa23.03■■□□□ 1.28
EDC3-214ENST00000568176 CNBD1Q8NA66 436 aa23.02■■□□□ 1.28
EDC3-214ENST00000568176 BCL11AQ9H165 835 aa23.02■■□□□ 1.28
EDC3-214ENST00000568176 ITGA6P23229 1130 aa23.01■■□□□ 1.27
EDC3-214ENST00000568176 MMP10P09238 476 aa23.01■■□□□ 1.27
EDC3-214ENST00000568176 C16orf71Q8IYS4 520 aaPredicted RBP23.01■■□□□ 1.27
EDC3-214ENST00000568176 RGS3P49796 1198 aa23■■□□□ 1.27
EDC3-214ENST00000568176 PUS3Q9BZE2 481 aaKnown RBP23■■□□□ 1.27
EDC3-214ENST00000568176 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
EDC3-214ENST00000568176 SASH1O94885 1247 aa22.99■■□□□ 1.27
EDC3-214ENST00000568176 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
EDC3-214ENST00000568176 IFIT5Q13325 482 aaKnown RBP22.98■■□□□ 1.27
EDC3-214ENST00000568176 LRRC24Q50LG9 513 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 RHPN1Q8TCX5 695 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 OTUD7AQ8TE49 926 aaPredicted RBP22.98■■□□□ 1.27
EDC3-214ENST00000568176 LRRCC1Q9C099 1032 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 IL1RAPL2Q9NP60 686 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 ANKRD31Q8N7Z5 1873 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 NPHP1O15259 732 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 SF3B3Q15393 1217 aaKnown RBP22.98■■□□□ 1.27
EDC3-214ENST00000568176 ATG9AQ7Z3C6 839 aa22.98■■□□□ 1.27
EDC3-214ENST00000568176 RAB11FIP3O75154 756 aa22.97■■□□□ 1.27
EDC3-214ENST00000568176 OS9Q13438 667 aaPredicted RBP22.97■■□□□ 1.27
EDC3-214ENST00000568176 CCDC152Q4G0S7 254 aa22.97■■□□□ 1.27
EDC3-214ENST00000568176 RTL9Q8NET4 1388 aa22.97■■□□□ 1.27
EDC3-214ENST00000568176 HSP90B1P14625 803 aaKnown RBP22.96■■□□□ 1.27
EDC3-214ENST00000568176 G3BP1Q13283 466 aaKnown RBP eCLIP22.96■■□□□ 1.27
EDC3-214ENST00000568176 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
EDC3-214ENST00000568176 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
EDC3-214ENST00000568176 KIF1BPQ96EK5 621 aa22.96■■□□□ 1.27
EDC3-214ENST00000568176 LRP5O75197 1615 aa22.96■■□□□ 1.27
EDC3-214ENST00000568176 HSP90AB4PQ58FF6 505 aa22.95■■□□□ 1.26
EDC3-214ENST00000568176 NLRP3Q96P20 1036 aa22.95■■□□□ 1.26
EDC3-214ENST00000568176 RIC1Q4ADV7 1423 aa22.95■■□□□ 1.26
EDC3-214ENST00000568176 EYA2O00167 538 aa22.94■■□□□ 1.26
EDC3-214ENST00000568176 PARP3Q9Y6F1 533 aa22.94■■□□□ 1.26
EDC3-214ENST00000568176 ST5P78524 1137 aa22.94■■□□□ 1.26
EDC3-214ENST00000568176 TFCP2Q12800 502 aa22.93■■□□□ 1.26
EDC3-214ENST00000568176 TAF7LQ5H9L4 462 aa22.93■■□□□ 1.26
EDC3-214ENST00000568176 CIAO1O76071 339 aa22.92■■□□□ 1.26
EDC3-214ENST00000568176 ERC1Q8IUD2 1116 aa22.92■■□□□ 1.26
EDC3-214ENST00000568176 RIPOR2Q9Y4F9 1068 aa22.92■■□□□ 1.26
EDC3-214ENST00000568176 ZBTB7AO95365 584 aa22.91■■□□□ 1.26
EDC3-214ENST00000568176 PLEKHM2Q8IWE5 1019 aa22.91■■□□□ 1.26
EDC3-214ENST00000568176 CELF1Q92879 486 aaKnown RBP22.91■■□□□ 1.26
EDC3-214ENST00000568176 SALL3Q9BXA9 1300 aa22.9■■□□□ 1.26
EDC3-214ENST00000568176 PSDA5PKW4 1024 aaPredicted RBP22.9■■□□□ 1.26
EDC3-214ENST00000568176 LDHAL6AQ6ZMR3 332 aa22.9■■□□□ 1.26
EDC3-214ENST00000568176 SLC16A10Q8TF71 515 aa22.9■■□□□ 1.26
EDC3-214ENST00000568176 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
EDC3-214ENST00000568176 IL15P40933 162 aaPredicted RBP22.89■■□□□ 1.26
EDC3-214ENST00000568176 CRY2Q49AN0 593 aa22.89■■□□□ 1.26
EDC3-214ENST00000568176 KLRG2A4D1S0 409 aaPredicted RBP22.89■■□□□ 1.25
EDC3-214ENST00000568176 SLC51AQ86UW1 340 aa22.89■■□□□ 1.25
EDC3-214ENST00000568176 EAF2Q96CJ1 260 aaPredicted RBP22.89■■□□□ 1.25
EDC3-214ENST00000568176 COL11A2P13942 1736 aaPredicted RBP22.89■■□□□ 1.25
EDC3-214ENST00000568176 TSHZ3Q63HK5 1081 aa22.88■■□□□ 1.25
EDC3-214ENST00000568176 FBXO3Q9UK99 471 aa22.88■■□□□ 1.25
EDC3-214ENST00000568176 BRIP1Q9BX63 1249 aa22.87■■□□□ 1.25
EDC3-214ENST00000568176 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
EDC3-214ENST00000568176 TLR7Q9NYK1 1049 aaKnown RBP22.87■■□□□ 1.25
EDC3-214ENST00000568176 ATF5Q9Y2D1 282 aaPredicted RBP22.87■■□□□ 1.25
EDC3-214ENST00000568176 A0A1B0GUL6 1792 aa22.86■■□□□ 1.25
EDC3-214ENST00000568176 AACSQ86V21 672 aa22.86■■□□□ 1.25
EDC3-214ENST00000568176 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
EDC3-214ENST00000568176 VGLL2Q8N8G2 317 aa22.86■■□□□ 1.25
EDC3-214ENST00000568176 CDC5LQ99459 802 aaKnown RBP22.86■■□□□ 1.25
EDC3-214ENST00000568176 TNNI3KQ59H18 835 aa22.85■■□□□ 1.25
EDC3-214ENST00000568176 DDX46Q7L014 1031 aaKnown RBP22.85■■□□□ 1.25
EDC3-214ENST00000568176 ANKRD18AQ8IVF6 992 aa22.85■■□□□ 1.25
EDC3-214ENST00000568176 MPHOSPH8Q99549 860 aa22.85■■□□□ 1.25
EDC3-214ENST00000568176 CCDC8Q9H0W5 538 aaPredicted RBP22.85■■□□□ 1.25
EDC3-214ENST00000568176 FPGT-TNNI3KV9GXZ4 949 aa22.85■■□□□ 1.25
EDC3-214ENST00000568176 IGHMBP2P38935 993 aaKnown RBP22.85■■□□□ 1.25
EDC3-214ENST00000568176 PDE1AP54750 535 aa22.85■■□□□ 1.25
EDC3-214ENST00000568176 HELBQ8NG08 1087 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms