RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 API5Q9BZZ5 524 aaKnown RBP16.1■□□□□ 0.17
GINS3-209ENST00000567909 SPEF2Q9C093 1822 aa16.1■□□□□ 0.17
GINS3-209ENST00000567909 GRM8O00222 908 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 CTSWP56202 376 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 CCDC93Q567U6 631 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
GINS3-209ENST00000567909 NFKBIEO00221 500 aa16.08■□□□□ 0.16
GINS3-209ENST00000567909 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.16
GINS3-209ENST00000567909 CASP7P55210 303 aa16.08■□□□□ 0.16
GINS3-209ENST00000567909 GRAPQ13588 217 aa16.08■□□□□ 0.16
GINS3-209ENST00000567909 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
GINS3-209ENST00000567909 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
GINS3-209ENST00000567909 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
GINS3-209ENST00000567909 ARHGAP45Q92619 1136 aa16.07■□□□□ 0.16
GINS3-209ENST00000567909 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
GINS3-209ENST00000567909 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
GINS3-209ENST00000567909 SEC31BQ9NQW1 1179 aa16.07■□□□□ 0.16
GINS3-209ENST00000567909 COL4A1P02462 1669 aa16.07■□□□□ 0.16
GINS3-209ENST00000567909 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
GINS3-209ENST00000567909 BBOX1O75936 387 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
GINS3-209ENST00000567909 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 PLA2G12BQ9BX93 195 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
GINS3-209ENST00000567909 NBPF7P0C2Y1 421 aaPredicted RBP16.05■□□□□ 0.16
GINS3-209ENST00000567909 TRIM27P14373 513 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 CC2D2BQ6DHV5 1058 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 GREM2Q9H772 168 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
GINS3-209ENST00000567909 LMNB1P20700 586 aa16.04■□□□□ 0.16
GINS3-209ENST00000567909 PRELPP51888 382 aa16.04■□□□□ 0.16
GINS3-209ENST00000567909 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
GINS3-209ENST00000567909 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
GINS3-209ENST00000567909 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 FOXO4P98177 505 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 FKBP4Q02790 459 aaKnown RBP eCLIP16.03■□□□□ 0.16
GINS3-209ENST00000567909 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 EPHA10Q5JZY3 1008 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 USP44Q9H0E7 712 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
GINS3-209ENST00000567909 UTYO14607 1347 aa16.02■□□□□ 0.16
GINS3-209ENST00000567909 LTBP3Q9NS15 1303 aa16.02■□□□□ 0.16
GINS3-209ENST00000567909 ITGA6P23229 1130 aa16.02■□□□□ 0.16
GINS3-209ENST00000567909 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
GINS3-209ENST00000567909 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
GINS3-209ENST00000567909 CDC5LQ99459 802 aaKnown RBP16.02■□□□□ 0.16
GINS3-209ENST00000567909 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.16
GINS3-209ENST00000567909 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
GINS3-209ENST00000567909 CSF1RP07333 972 aa16.01■□□□□ 0.15
GINS3-209ENST00000567909 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
GINS3-209ENST00000567909 INTS3Q68E01 1043 aaKnown RBP16.01■□□□□ 0.15
GINS3-209ENST00000567909 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
GINS3-209ENST00000567909 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
GINS3-209ENST00000567909 ANKRD18BA2A2Z9 1011 aa16■□□□□ 0.15
GINS3-209ENST00000567909 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
GINS3-209ENST00000567909 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
GINS3-209ENST00000567909 MPNDQ8N594 471 aa16■□□□□ 0.15
GINS3-209ENST00000567909 KAZALD1Q96I82 304 aa16■□□□□ 0.15
GINS3-209ENST00000567909 PSMD1Q99460 953 aa16■□□□□ 0.15
GINS3-209ENST00000567909 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
GINS3-209ENST00000567909 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
GINS3-209ENST00000567909 IGHMBP2P38935 993 aaKnown RBP15.99■□□□□ 0.15
GINS3-209ENST00000567909 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
GINS3-209ENST00000567909 TMEM57Q8N5G2 664 aa15.99■□□□□ 0.15
GINS3-209ENST00000567909 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
GINS3-209ENST00000567909 MEIS3Q99687 375 aa15.99■□□□□ 0.15
GINS3-209ENST00000567909 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
GINS3-209ENST00000567909 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
GINS3-209ENST00000567909 GPSM2P81274 684 aa15.98■□□□□ 0.15
GINS3-209ENST00000567909 CCDC57Q2TAC2 916 aa15.98■□□□□ 0.15
GINS3-209ENST00000567909 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
GINS3-209ENST00000567909 MPHOSPH8Q99549 860 aa15.98■□□□□ 0.15
GINS3-209ENST00000567909 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
GINS3-209ENST00000567909 C6orf229H3BNL8 230 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 PLIN1O60240 522 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 RLBP1P12271 317 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
GINS3-209ENST00000567909 SUPT20HQ8NEM7 779 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 LTBP1Q14766 1721 aa15.97■□□□□ 0.15
GINS3-209ENST00000567909 PPIP5K2O43314 1243 aa15.96■□□□□ 0.15
GINS3-209ENST00000567909 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
GINS3-209ENST00000567909 LARGE2Q8N3Y3 721 aa15.96■□□□□ 0.15
GINS3-209ENST00000567909 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
GINS3-209ENST00000567909 ZNF594Q96JF6 807 aaPredicted RBP15.96■□□□□ 0.15
GINS3-209ENST00000567909 BSDC1Q9NW68 430 aaPredicted RBP15.96■□□□□ 0.15
GINS3-209ENST00000567909 LRRFIP2Q9Y608 721 aaKnown RBP15.96■□□□□ 0.15
GINS3-209ENST00000567909 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms