RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 LDHDQ86WU2 507 aa15.77■□□□□ 0.12
GTF3C1-208ENST00000567843 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.12
GTF3C1-208ENST00000567843 EPS15P42566 896 aa15.76■□□□□ 0.11
GTF3C1-208ENST00000567843 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-208ENST00000567843 TAF1P21675 1872 aa15.76■□□□□ 0.11
GTF3C1-208ENST00000567843 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 SF3B3Q15393 1217 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 G2E3Q7L622 706 aa15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 SEC31BQ9NQW1 1179 aa15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 LAMB2P55268 1798 aa15.75■□□□□ 0.11
GTF3C1-208ENST00000567843 RAD17O75943 681 aa15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 SCNN1DP51172 638 aa15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 CXCL9Q07325 125 aa15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 CCDC27Q2M243 656 aa15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 ZBTB38Q8NAP3 1195 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 METTL22Q9BUU2 404 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
GTF3C1-208ENST00000567843 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 RIMBP2O15034 1052 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 JMYQ8N9B5 988 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 CWC25Q9NXE8 425 aaPredicted RBP15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 ZNRF3Q9ULT6 936 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 COL4A1P02462 1669 aa15.73■□□□□ 0.11
GTF3C1-208ENST00000567843 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 GPSM2P81274 684 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 PNMA8AQ86V59 439 aaPredicted RBP15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 CNTROBQ8N137 903 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
GTF3C1-208ENST00000567843 PASKQ96RG2 1323 aa15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 SCN4AP35499 1836 aa15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 GMPSP49915 693 aaPredicted RBP15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 RPS8P62241 208 aaKnown RBP15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 CWF19L2Q2TBE0 894 aaKnown RBP15.71■□□□□ 0.11
GTF3C1-208ENST00000567843 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.1
GTF3C1-208ENST00000567843 YDJCA8MPS7 323 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 DOK7Q18PE1 504 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 CIAPIN1Q6FI81 312 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 CHMP4AQ9BY43 222 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 DBNDD1Q9H9R9 158 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 POLLQ9UGP5 575 aa15.7■□□□□ 0.1
GTF3C1-208ENST00000567843 IL16Q14005 1332 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 LTBP1Q14766 1721 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 SHTN1A0MZ66 631 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 EXOSC9Q06265 439 aaKnown RBP15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 WASHC4Q2M389 1173 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 TMC4Q7Z404 712 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 VPS33BQ9H267 617 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 PCNTO95613 3336 aa15.69■□□□□ 0.1
GTF3C1-208ENST00000567843 TMEM88BA6NKF7 163 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 TRAF5O00463 557 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 PDE8AO60658 829 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 CCDC152Q4G0S7 254 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 KCNQ5Q9NR82 932 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 GPRC5DQ9NZD1 345 aa15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
GTF3C1-208ENST00000567843 HSPA1AP0DMV8 641 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-208ENST00000567843 HSPA1BP0DMV9 641 aaKnown RBP15.67■□□□□ 0.1
GTF3C1-208ENST00000567843 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
GTF3C1-208ENST00000567843 TBC1D16Q8TBP0 767 aa15.67■□□□□ 0.1
GTF3C1-208ENST00000567843 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 VAMP4O75379 141 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 FLIIQ13045 1269 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 FKBP5Q13451 457 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 TNIP1Q15025 636 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 IFFO2Q5TF58 517 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 USP50Q70EL3 339 aaPredicted RBP15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
GTF3C1-208ENST00000567843 PSMD14O00487 310 aa15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 UFL1O94874 794 aa15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 HSP90B1P14625 803 aaKnown RBP15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 COL13A1Q5TAT6 717 aaPredicted RBP15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 TRPM4Q8TD43 1214 aa15.65■□□□□ 0.1
GTF3C1-208ENST00000567843 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.1
GTF3C1-208ENST00000567843 WTIPA6NIX2 430 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms