RNA–Protein interactions for RNA: ENST00000567722.5

CHRFAM7A-205, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best)

Gene CHRFAM7A, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-205ENST00000567722 TAF1DQ9H5J8 278 aaPredicted RBP26.46■■□□□ 1.83
CHRFAM7A-205ENST00000567722 GJA3Q9Y6H8 435 aa26.46■■□□□ 1.83
CHRFAM7A-205ENST00000567722 DDX60Q8IY21 1712 aaKnown RBP26.45■■□□□ 1.83
CHRFAM7A-205ENST00000567722 HTRA3P83110 453 aa26.45■■□□□ 1.82
CHRFAM7A-205ENST00000567722 EAPPQ56P03 285 aaPredicted RBP26.45■■□□□ 1.82
CHRFAM7A-205ENST00000567722 SLC51AQ86UW1 340 aa26.45■■□□□ 1.82
CHRFAM7A-205ENST00000567722 FAM9BQ8IZU0 186 aa26.45■■□□□ 1.82
CHRFAM7A-205ENST00000567722 CCDC191Q8NCU4 936 aa26.45■■□□□ 1.82
CHRFAM7A-205ENST00000567722 LMOD1P29536 600 aaPredicted RBP26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 SF3B3Q15393 1217 aaKnown RBP26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 AOC3Q16853 763 aa26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 LDHDQ86WU2 507 aa26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 METTL22Q9BUU2 404 aaPredicted RBP26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 CWC25Q9NXE8 425 aaPredicted RBP26.44■■□□□ 1.82
CHRFAM7A-205ENST00000567722 NEXNQ0ZGT2 675 aa26.43■■□□□ 1.82
CHRFAM7A-205ENST00000567722 MAP3K2Q9Y2U5 619 aa26.43■■□□□ 1.82
CHRFAM7A-205ENST00000567722 EPHX2P34913 555 aa26.42■■□□□ 1.82
CHRFAM7A-205ENST00000567722 PNMA8AQ86V59 439 aaPredicted RBP26.42■■□□□ 1.82
CHRFAM7A-205ENST00000567722 WDR63Q8IWG1 891 aa26.42■■□□□ 1.82
CHRFAM7A-205ENST00000567722 CLEC11AQ9Y240 323 aa26.42■■□□□ 1.82
CHRFAM7A-205ENST00000567722 FANCIQ9NVI1 1328 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 POTEIP0CG38 1075 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 POTEJP0CG39 1038 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 KSR2Q6VAB6 950 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 DNAJC5GQ8N7S2 189 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 KLRG1Q96E93 195 aa26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 RTFDC1Q9BY42 306 aaPredicted RBP26.41■■□□□ 1.82
CHRFAM7A-205ENST00000567722 PCCAP05165 728 aaPredicted RBP26.4■■□□□ 1.82
CHRFAM7A-205ENST00000567722 COL4A5P29400 1685 aa26.4■■□□□ 1.82
CHRFAM7A-205ENST00000567722 PI4KAP2A4QPH2 592 aa26.39■■□□□ 1.82
CHRFAM7A-205ENST00000567722 SLC4A2P04920 1241 aa26.39■■□□□ 1.82
CHRFAM7A-205ENST00000567722 PI4KAP1Q8N8J0 262 aa26.39■■□□□ 1.82
CHRFAM7A-205ENST00000567722 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
CHRFAM7A-205ENST00000567722 CELF1Q92879 486 aaKnown RBP26.38■■□□□ 1.81
CHRFAM7A-205ENST00000567722 ZNRF3Q9ULT6 936 aa26.38■■□□□ 1.81
CHRFAM7A-205ENST00000567722 TAF1P21675 1872 aa26.38■■□□□ 1.81
CHRFAM7A-205ENST00000567722 KIAA2012Q0VF49 1180 aa26.37■■□□□ 1.81
CHRFAM7A-205ENST00000567722 PDE8AO60658 829 aa26.36■■□□□ 1.81
CHRFAM7A-205ENST00000567722 MYH16Q9H6N6 1097 aa26.36■■□□□ 1.81
CHRFAM7A-205ENST00000567722 NSFL1CQ9UNZ2 370 aaKnown RBP26.36■■□□□ 1.81
CHRFAM7A-205ENST00000567722 RPS8P62241 208 aaKnown RBP26.35■■□□□ 1.81
CHRFAM7A-205ENST00000567722 LRRC37AA6NMS7 1700 aa26.34■■□□□ 1.81
CHRFAM7A-205ENST00000567722 JARID2Q92833 1246 aaPredicted RBP26.34■■□□□ 1.81
CHRFAM7A-205ENST00000567722 C6orf229H3BNL8 230 aa26.33■■□□□ 1.81
CHRFAM7A-205ENST00000567722 FLIIQ13045 1269 aa26.33■■□□□ 1.81
CHRFAM7A-205ENST00000567722 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.81
CHRFAM7A-205ENST00000567722 EXOSC9Q06265 439 aaKnown RBP26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 TNIP1Q15025 636 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 WASHC4Q2M389 1173 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CIAPIN1Q6FI81 312 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 G2E3Q7L622 706 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 EYA3Q99504 573 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CREBZFQ9NS37 354 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CDHR2Q9BYE9 1310 aa26.32■■□□□ 1.8
CHRFAM7A-205ENST00000567722 SCNN1DP51172 638 aa26.31■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CXCL9Q07325 125 aa26.31■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CCDC85AQ96PX6 553 aaPredicted RBP26.31■■□□□ 1.8
CHRFAM7A-205ENST00000567722 SEC31BQ9NQW1 1179 aa26.31■■□□□ 1.8
CHRFAM7A-205ENST00000567722 IGKV5-2P06315 115 aa26.3■■□□□ 1.8
CHRFAM7A-205ENST00000567722 EPS15P42566 896 aa26.3■■□□□ 1.8
CHRFAM7A-205ENST00000567722 BCL2L13Q9BXK5 485 aa26.3■■□□□ 1.8
CHRFAM7A-205ENST00000567722 DUOX1Q9NRD9 1551 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 NEURL1BA8MQ27 555 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 VAMP4O75379 141 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 RAD17O75943 681 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 GPSM2P81274 684 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CWF19L2Q2TBE0 894 aaKnown RBP26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 ANKRD18AQ8IVF6 992 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 ANKIB1Q9P2G1 1089 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CACNA1FO60840 1977 aa26.29■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CTSWP56202 376 aa26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 MAP1SQ66K74 1059 aaPredicted RBP26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 USP50Q70EL3 339 aaPredicted RBP26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CNTROBQ8N137 903 aa26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 JMYQ8N9B5 988 aa26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 CDC5LQ99459 802 aaKnown RBP26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 PASKQ96RG2 1323 aa26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 ADAMTSL1Q8N6G6 1762 aa26.28■■□□□ 1.8
CHRFAM7A-205ENST00000567722 G3V3G9 751 aa26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 RIMBP2O15034 1052 aa26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 DCAF8Q5TAQ9 597 aa26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 DNAAF4Q8WXU2 420 aa26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 ADARB2Q9NS39 739 aaKnown RBP26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 GPRC5DQ9NZD1 345 aa26.27■■□□□ 1.8
CHRFAM7A-205ENST00000567722 GMPSP49915 693 aaPredicted RBP26.26■■□□□ 1.79
CHRFAM7A-205ENST00000567722 UBE3BQ7Z3V4 1068 aa26.26■■□□□ 1.79
CHRFAM7A-205ENST00000567722 POLLQ9UGP5 575 aa26.26■■□□□ 1.79
CHRFAM7A-205ENST00000567722 LTBP1Q14766 1721 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 UFL1O94874 794 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 TBC1D16Q8TBP0 767 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 ZC3H12CQ9C0D7 883 aaKnown RBP26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 DBNDD1Q9H9R9 158 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 GGA1Q9UJY5 639 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 COL4A1P02462 1669 aa26.25■■□□□ 1.79
CHRFAM7A-205ENST00000567722 TMEM88BA6NKF7 163 aa26.24■■□□□ 1.79
CHRFAM7A-205ENST00000567722 ITGBL1O95965 494 aaPredicted RBP26.24■■□□□ 1.79
CHRFAM7A-205ENST00000567722 SPINK5Q9NQ38 1064 aaPredicted RBP26.24■■□□□ 1.79
CHRFAM7A-205ENST00000567722 PODXL2Q9NZ53 605 aa26.24■■□□□ 1.79
CHRFAM7A-205ENST00000567722 GCKRQ14397 625 aa26.23■■□□□ 1.79
CHRFAM7A-205ENST00000567722 LINS1Q8NG48 757 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms