RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 C21orf2O43822 256 aa21.81■■□□□ 1.08
COMMD4-220ENST00000567720 PDE8AO60658 829 aa21.81■■□□□ 1.08
COMMD4-220ENST00000567720 CTSWP56202 376 aa21.81■■□□□ 1.08
COMMD4-220ENST00000567720 C7orf43Q8WVR3 580 aa21.81■■□□□ 1.08
COMMD4-220ENST00000567720 API5Q9BZZ5 524 aaKnown RBP21.81■■□□□ 1.08
COMMD4-220ENST00000567720 TRIM27P14373 513 aa21.8■■□□□ 1.08
COMMD4-220ENST00000567720 ALDH1B1P30837 517 aa21.8■■□□□ 1.08
COMMD4-220ENST00000567720 OLFM4Q6UX06 510 aa21.8■■□□□ 1.08
COMMD4-220ENST00000567720 ARHGAP45Q92619 1136 aa21.8■■□□□ 1.08
COMMD4-220ENST00000567720 NFKBIEO00221 500 aa21.79■■□□□ 1.08
COMMD4-220ENST00000567720 PPEF1O14829 653 aaPredicted RBP21.79■■□□□ 1.08
COMMD4-220ENST00000567720 HSP90B1P14625 803 aaKnown RBP21.79■■□□□ 1.08
COMMD4-220ENST00000567720 RASSF7Q02833 373 aa21.79■■□□□ 1.08
COMMD4-220ENST00000567720 FRAT1Q92837 279 aaPredicted RBP21.79■■□□□ 1.08
COMMD4-220ENST00000567720 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
COMMD4-220ENST00000567720 RTL9Q8NET4 1388 aa21.78■■□□□ 1.08
COMMD4-220ENST00000567720 GRAPQ13588 217 aa21.78■■□□□ 1.08
COMMD4-220ENST00000567720 ARHGAP27Q6ZUM4 889 aa21.78■■□□□ 1.08
COMMD4-220ENST00000567720 DDX46Q7L014 1031 aaKnown RBP21.78■■□□□ 1.08
COMMD4-220ENST00000567720 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
COMMD4-220ENST00000567720 CCDC85AQ96PX6 553 aaPredicted RBP21.78■■□□□ 1.08
COMMD4-220ENST00000567720 UTYO14607 1347 aa21.78■■□□□ 1.08
COMMD4-220ENST00000567720 ATF7IPQ6VMQ6 1270 aa21.77■■□□□ 1.08
COMMD4-220ENST00000567720 NBPF7P0C2Y1 421 aaPredicted RBP21.76■■□□□ 1.07
COMMD4-220ENST00000567720 PRELPP51888 382 aa21.76■■□□□ 1.07
COMMD4-220ENST00000567720 CCDC152Q4G0S7 254 aa21.76■■□□□ 1.07
COMMD4-220ENST00000567720 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
COMMD4-220ENST00000567720 TTLL11Q8NHH1 800 aa21.76■■□□□ 1.07
COMMD4-220ENST00000567720 CELF1Q92879 486 aaKnown RBP21.76■■□□□ 1.07
COMMD4-220ENST00000567720 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
COMMD4-220ENST00000567720 C9orf78Q9NZ63 289 aaPredicted RBP21.76■■□□□ 1.07
COMMD4-220ENST00000567720 CCT4P50991 539 aaKnown RBP21.75■■□□□ 1.07
COMMD4-220ENST00000567720 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
COMMD4-220ENST00000567720 GREM2Q9H772 168 aa21.75■■□□□ 1.07
COMMD4-220ENST00000567720 IPO8O15397 1037 aaKnown RBP21.74■■□□□ 1.07
COMMD4-220ENST00000567720 FOXO4P98177 505 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 FAM161AQ3B820 660 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 EPHA10Q5JZY3 1008 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 ZKSCAN2Q63HK3 967 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 SUCLG2Q96I99 432 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 LTBP3Q9NS15 1303 aa21.74■■□□□ 1.07
COMMD4-220ENST00000567720 COL4A5P29400 1685 aa21.73■■□□□ 1.07
COMMD4-220ENST00000567720 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
COMMD4-220ENST00000567720 KAZALD1Q96I82 304 aa21.73■■□□□ 1.07
COMMD4-220ENST00000567720 USP44Q9H0E7 712 aa21.73■■□□□ 1.07
COMMD4-220ENST00000567720 INTS3Q68E01 1043 aaKnown RBP21.72■■□□□ 1.07
COMMD4-220ENST00000567720 TAOK3Q9H2K8 898 aa21.72■■□□□ 1.07
COMMD4-220ENST00000567720 ATP6V0A2Q9Y487 856 aa21.72■■□□□ 1.07
COMMD4-220ENST00000567720 CSF1RP07333 972 aa21.71■■□□□ 1.07
COMMD4-220ENST00000567720 BBOX1O75936 387 aa21.7■■□□□ 1.06
COMMD4-220ENST00000567720 RLBP1P12271 317 aa21.69■■□□□ 1.06
COMMD4-220ENST00000567720 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
COMMD4-220ENST00000567720 CC2D2BQ6DHV5 1058 aa21.69■■□□□ 1.06
COMMD4-220ENST00000567720 TMC4Q7Z404 712 aa21.69■■□□□ 1.06
COMMD4-220ENST00000567720 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
COMMD4-220ENST00000567720 MEIS3Q99687 375 aa21.69■■□□□ 1.06
COMMD4-220ENST00000567720 BICC1Q9H694 974 aaKnown RBP21.69■■□□□ 1.06
COMMD4-220ENST00000567720 LMNB1P20700 586 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 ITGA6P23229 1130 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 YY1P25490 414 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 RPS8P62241 208 aaKnown RBP21.68■■□□□ 1.06
COMMD4-220ENST00000567720 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 LMBR1LQ6UX01 489 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
COMMD4-220ENST00000567720 RABL6Q3YEC7 729 aaPredicted RBP21.67■■□□□ 1.06
COMMD4-220ENST00000567720 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
COMMD4-220ENST00000567720 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
COMMD4-220ENST00000567720 PSMD1Q99460 953 aa21.67■■□□□ 1.06
COMMD4-220ENST00000567720 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
COMMD4-220ENST00000567720 DZIP1LQ8IYY4 767 aaKnown RBP21.66■■□□□ 1.06
COMMD4-220ENST00000567720 ZNF277Q9NRM2 450 aaPredicted RBP21.66■■□□□ 1.06
COMMD4-220ENST00000567720 CHMP3Q9Y3E7 222 aa21.66■■□□□ 1.06
COMMD4-220ENST00000567720 PSME4Q14997 1843 aa21.65■■□□□ 1.06
COMMD4-220ENST00000567720 UBTFL1P0CB47 393 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-220ENST00000567720 ZNF646O15015 1829 aaPredicted RBP21.64■■□□□ 1.05
COMMD4-220ENST00000567720 ANKRD18BA2A2Z9 1011 aa21.63■■□□□ 1.05
COMMD4-220ENST00000567720 PLIN1O60240 522 aa21.63■■□□□ 1.05
COMMD4-220ENST00000567720 GPSM2P81274 684 aa21.63■■□□□ 1.05
COMMD4-220ENST00000567720 IFIT5Q13325 482 aaKnown RBP21.63■■□□□ 1.05
COMMD4-220ENST00000567720 GRIPAP1Q4V328 841 aa21.63■■□□□ 1.05
COMMD4-220ENST00000567720 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
COMMD4-220ENST00000567720 SCN9AQ15858 1988 aa21.62■■□□□ 1.05
COMMD4-220ENST00000567720 IARSP41252 1262 aaKnown RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 DPP8Q6V1X1 898 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 MPNDQ8N594 471 aa21.62■■□□□ 1.05
COMMD4-220ENST00000567720 RTFDC1Q9BY42 306 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 TMX4Q9H1E5 349 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 BSDC1Q9NW68 430 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 LRRFIP2Q9Y608 721 aaKnown RBP21.62■■□□□ 1.05
COMMD4-220ENST00000567720 ZC3H4Q9UPT8 1303 aaKnown RBP21.61■■□□□ 1.05
COMMD4-220ENST00000567720 IGHMBP2P38935 993 aaKnown RBP21.61■■□□□ 1.05
COMMD4-220ENST00000567720 ITPRIPQ8IWB1 547 aa21.61■■□□□ 1.05
COMMD4-220ENST00000567720 ZNF594Q96JF6 807 aaPredicted RBP21.61■■□□□ 1.05
COMMD4-220ENST00000567720 GNAI3P08754 354 aa21.6■■□□□ 1.05
COMMD4-220ENST00000567720 CCDC57Q2TAC2 916 aa21.6■■□□□ 1.05
COMMD4-220ENST00000567720 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms