RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 HSP90AB4PQ58FF6 505 aa15.53■□□□□ 0.08
CFDP1-207ENST00000566901 NOP58Q9Y2X3 529 aaKnown RBP15.53■□□□□ 0.08
CFDP1-207ENST00000566901 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
CFDP1-207ENST00000566901 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
CFDP1-207ENST00000566901 HSP90B1P14625 803 aaKnown RBP15.52■□□□□ 0.08
CFDP1-207ENST00000566901 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
CFDP1-207ENST00000566901 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
CFDP1-207ENST00000566901 TRAPPC3LQ5T215 181 aa15.51■□□□□ 0.07
CFDP1-207ENST00000566901 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
CFDP1-207ENST00000566901 ZPR1O75312 459 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 GPTP24298 496 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 FOXO4P98177 505 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 EPHA10Q5JZY3 1008 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 ARHGEF1Q92888 912 aaKnown RBP15.5■□□□□ 0.07
CFDP1-207ENST00000566901 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
CFDP1-207ENST00000566901 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 MYH3P11055 1940 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 NTSR2O95665 410 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 RFC4P35249 363 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 ERC1Q8IUD2 1116 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
CFDP1-207ENST00000566901 GPBP1L1Q9HC44 474 aaPredicted RBP15.49■□□□□ 0.07
CFDP1-207ENST00000566901 COPRSQ9NQ92 184 aa15.49■□□□□ 0.07
CFDP1-207ENST00000566901 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
CFDP1-207ENST00000566901 TRMT112Q9UI30 125 aaKnown RBP15.49■□□□□ 0.07
CFDP1-207ENST00000566901 NIP7Q9Y221 180 aaKnown RBP eCLIP15.49■□□□□ 0.07
CFDP1-207ENST00000566901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.48■□□□□ 0.07
CFDP1-207ENST00000566901 RFX5P48382 616 aaPredicted RBP15.48■□□□□ 0.07
CFDP1-207ENST00000566901 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
CFDP1-207ENST00000566901 AMIGO3Q86WK7 504 aa15.48■□□□□ 0.07
CFDP1-207ENST00000566901 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
CFDP1-207ENST00000566901 CSF1RP07333 972 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 PDE4AP27815 886 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 RIC1Q4ADV7 1423 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 SUSD4Q5VX71 490 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 LMBR1LQ6UX01 489 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 SMIM5Q71RC9 77 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 DDX60Q8IY21 1712 aaKnown RBP15.47■□□□□ 0.07
CFDP1-207ENST00000566901 KIF1BPQ96EK5 621 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 FAM89AQ96GI7 184 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 EXOC6BQ9Y2D4 811 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 RTL9Q8NET4 1388 aa15.47■□□□□ 0.07
CFDP1-207ENST00000566901 IRS4O14654 1257 aaPredicted RBP15.46■□□□□ 0.07
CFDP1-207ENST00000566901 PDE8AO60658 829 aa15.46■□□□□ 0.07
CFDP1-207ENST00000566901 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
CFDP1-207ENST00000566901 CTSWP56202 376 aa15.46■□□□□ 0.07
CFDP1-207ENST00000566901 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
CFDP1-207ENST00000566901 SRP68Q9UHB9 627 aaKnown RBP15.46■□□□□ 0.07
CFDP1-207ENST00000566901 CEP350Q5VT06 3117 aa15.46■□□□□ 0.07
CFDP1-207ENST00000566901 CARMIL3Q8ND23 1372 aa15.46■□□□□ 0.07
CFDP1-207ENST00000566901 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
CFDP1-207ENST00000566901 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
CFDP1-207ENST00000566901 JARID2Q92833 1246 aaPredicted RBP15.45■□□□□ 0.06
CFDP1-207ENST00000566901 RGS3P49796 1198 aa15.44■□□□□ 0.06
CFDP1-207ENST00000566901 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
CFDP1-207ENST00000566901 RHPN1Q8TCX5 695 aa15.44■□□□□ 0.06
CFDP1-207ENST00000566901 SETDB2Q96T68 719 aa15.44■□□□□ 0.06
CFDP1-207ENST00000566901 CIAO1O76071 339 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 GYS1P13807 737 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 G3BP1Q13283 466 aaKnown RBP eCLIP15.43■□□□□ 0.06
CFDP1-207ENST00000566901 SLC10A5Q5PT55 438 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 SKAP1Q86WV1 359 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 AOX1Q06278 1338 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
CFDP1-207ENST00000566901 OS9Q13438 667 aaPredicted RBP15.42■□□□□ 0.06
CFDP1-207ENST00000566901 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
CFDP1-207ENST00000566901 TTLL11Q8NHH1 800 aa15.42■□□□□ 0.06
CFDP1-207ENST00000566901 OSBPL3Q9H4L5 887 aa15.42■□□□□ 0.06
CFDP1-207ENST00000566901 PA2G4Q9UQ80 394 aaKnown RBP15.42■□□□□ 0.06
CFDP1-207ENST00000566901 CCDC57Q2TAC2 916 aa15.41■□□□□ 0.06
CFDP1-207ENST00000566901 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
CFDP1-207ENST00000566901 MMP10P09238 476 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
CFDP1-207ENST00000566901 IFIT5Q13325 482 aaKnown RBP15.4■□□□□ 0.06
CFDP1-207ENST00000566901 NFIXQ14938 502 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
CFDP1-207ENST00000566901 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 TPTE2Q6XPS3 522 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 NBPF5PQ86XG9 351 aaPredicted RBP15.4■□□□□ 0.06
CFDP1-207ENST00000566901 PLEKHM2Q8IWE5 1019 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 CHMP3Q9Y3E7 222 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
CFDP1-207ENST00000566901 ABCC12Q96J65 1359 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 ANKRD18BA2A2Z9 1011 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 EYA2O00167 538 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 SMARCA5O60264 1052 aaPredicted RBP15.39■□□□□ 0.05
CFDP1-207ENST00000566901 SASH1O94885 1247 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 TM4SF1P30408 202 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
CFDP1-207ENST00000566901 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 GPR108Q9NPR9 543 aa15.39■□□□□ 0.05
CFDP1-207ENST00000566901 APBB1O00213 710 aa15.38■□□□□ 0.05
CFDP1-207ENST00000566901 ITGA6P23229 1130 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms