RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 IQCB1Q15051 598 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 TSGA10IPQ3SY00 556 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 CEP135Q66GS9 1140 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 KIF18AQ8NI77 898 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 MRFAP1L1Q96HT8 127 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 LRRC8AQ8IWT6 810 aa18.5■□□□□ 0.55
COMMD4-215ENST00000566843 FAM227BQ96M60 508 aa18.5■□□□□ 0.55
COMMD4-215ENST00000566843 HOXC9P31274 260 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 KCNJ4P48050 445 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 NAA30Q147X3 362 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-215ENST00000566843 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 NYAP1Q6ZVC0 841 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 FAM53CQ9NYF3 392 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 CHPF2Q9P2E5 772 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 MED23Q9ULK4 1368 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 SLFN14P0C7P3 912 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 RESTQ13127 1097 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 KCND1Q9NSA2 647 aa18.49■□□□□ 0.55
COMMD4-215ENST00000566843 ZNF397Q8NF99 534 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-215ENST00000566843 USP54Q70EL1 1684 aa18.48■□□□□ 0.55
COMMD4-215ENST00000566843 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
COMMD4-215ENST00000566843 EIF2S2P20042 333 aaKnown RBP18.48■□□□□ 0.55
COMMD4-215ENST00000566843 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
COMMD4-215ENST00000566843 MARF1Q9Y4F3 1742 aaKnown RBP18.48■□□□□ 0.55
COMMD4-215ENST00000566843 IGSF3O75054 1194 aa18.47■□□□□ 0.55
COMMD4-215ENST00000566843 ZNF771Q7L3S4 317 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-215ENST00000566843 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
COMMD4-215ENST00000566843 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
COMMD4-215ENST00000566843 AACSQ86V21 672 aa18.47■□□□□ 0.55
COMMD4-215ENST00000566843 HDAC5Q9UQL6 1122 aa18.46■□□□□ 0.55
COMMD4-215ENST00000566843 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
COMMD4-215ENST00000566843 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-215ENST00000566843 A0A0D9SFI3 127 aa18.46■□□□□ 0.54
COMMD4-215ENST00000566843 CTAGE5O15320 804 aa18.46■□□□□ 0.54
COMMD4-215ENST00000566843 SLFNL1Q499Z3 407 aa18.46■□□□□ 0.54
COMMD4-215ENST00000566843 ZSCAN16Q9H4T2 348 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-215ENST00000566843 ZNF335Q9H4Z2 1342 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-215ENST00000566843 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
COMMD4-215ENST00000566843 GTF3C6Q969F1 213 aa18.45■□□□□ 0.54
COMMD4-215ENST00000566843 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
COMMD4-215ENST00000566843 TAF6LQ9Y6J9 622 aa18.45■□□□□ 0.54
COMMD4-215ENST00000566843 GOLGA6L19H0YKK7 550 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 PTPN14Q15678 1187 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 STX1AQ16623 288 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 KRT222Q8N1A0 295 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 ERO1AQ96HE7 468 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 USP27XA6NNY8 438 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 TERF2Q15554 542 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 KMT5BQ4FZB7 885 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 C11orf57Q6ZUT1 292 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-215ENST00000566843 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
COMMD4-215ENST00000566843 ZNF215Q9UL58 517 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-215ENST00000566843 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 SASH1O94885 1247 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 CCZ1BP86790 482 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 CCZ1P86791 482 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-215ENST00000566843 EAF2Q96CJ1 260 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-215ENST00000566843 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 KRT32Q14532 448 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 ARID5BQ14865 1188 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 BRF1Q92994 677 aa18.43■□□□□ 0.54
COMMD4-215ENST00000566843 JAK2O60674 1132 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 SKILP12757 684 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 ZNF592Q92610 1267 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 RCOR1Q9UKL0 485 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 ADD1P35611 737 aaKnown RBP18.42■□□□□ 0.54
COMMD4-215ENST00000566843 NLRP6P59044 892 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 FAM193AP78312 1265 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 CCAR2Q8N163 923 aaKnown RBP18.42■□□□□ 0.54
COMMD4-215ENST00000566843 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
COMMD4-215ENST00000566843 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-215ENST00000566843 UTYO14607 1347 aa18.41■□□□□ 0.54
COMMD4-215ENST00000566843 ERBB3P21860 1342 aa18.41■□□□□ 0.54
COMMD4-215ENST00000566843 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
COMMD4-215ENST00000566843 KIF2AO00139 706 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-215ENST00000566843 STK3Q13188 491 aa18.41■□□□□ 0.54
COMMD4-215ENST00000566843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-215ENST00000566843 TAF5LO75529 589 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 DHX40Q8IX18 779 aaKnown RBP18.4■□□□□ 0.54
COMMD4-215ENST00000566843 SMARCC2Q8TAQ2 1214 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-215ENST00000566843 MRC1P22897 1456 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 ANXA1P04083 346 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 ZNF589Q86UQ0 364 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-215ENST00000566843 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 MAP3K2Q9Y2U5 619 aa18.4■□□□□ 0.54
COMMD4-215ENST00000566843 KCNQ3O43525 872 aa18.39■□□□□ 0.54
COMMD4-215ENST00000566843 SLU7O95391 586 aaKnown RBP18.39■□□□□ 0.54
COMMD4-215ENST00000566843 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.542e-6■□□□□ 9.5
COMMD4-215ENST00000566843 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.54
COMMD4-215ENST00000566843 LGR6Q9HBX8 967 aa18.39■□□□□ 0.54
COMMD4-215ENST00000566843 PHF8Q9UPP1 1060 aa18.39■□□□□ 0.54
COMMD4-215ENST00000566843 FBXO38Q6PIJ6 1188 aa18.39■□□□□ 0.53
COMMD4-215ENST00000566843 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
COMMD4-215ENST00000566843 ANO10Q9NW15 660 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms