RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
RNF40-210ENST00000566811 TTLL6Q8N841 843 aa25.55■■□□□ 1.68
RNF40-210ENST00000566811 CRAMP1Q96RY5 1269 aa25.55■■□□□ 1.68
RNF40-210ENST00000566811 WWC3Q9ULE0 1092 aa25.55■■□□□ 1.68
RNF40-210ENST00000566811 GNAI3P08754 354 aa25.54■■□□□ 1.68
RNF40-210ENST00000566811 PDE3AQ14432 1141 aa25.54■■□□□ 1.68
RNF40-210ENST00000566811 DALRD3Q5D0E6 543 aaKnown RBP25.54■■□□□ 1.68
RNF40-210ENST00000566811 SYNE4Q8N205 404 aa25.54■■□□□ 1.68
RNF40-210ENST00000566811 GPBP1L1Q9HC44 474 aaPredicted RBP25.54■■□□□ 1.68
RNF40-210ENST00000566811 IFFO2Q5TF58 517 aa25.53■■□□□ 1.68
RNF40-210ENST00000566811 DDX46Q7L014 1031 aaKnown RBP25.53■■□□□ 1.68
RNF40-210ENST00000566811 ZNF622Q969S3 477 aaKnown RBP eCLIP25.53■■□□□ 1.682e-10■□□□□ 10.1
RNF40-210ENST00000566811 CLUAP1Q96AJ1 413 aa25.53■■□□□ 1.68
RNF40-210ENST00000566811 SLX4Q8IY92 1834 aa25.53■■□□□ 1.68
RNF40-210ENST00000566811 LRRC37AA6NMS7 1700 aa25.52■■□□□ 1.68
RNF40-210ENST00000566811 SOGA3Q5TF21 947 aa25.52■■□□□ 1.68
RNF40-210ENST00000566811 TMC4Q7Z404 712 aa25.52■■□□□ 1.68
RNF40-210ENST00000566811 ZNF526Q8TF50 670 aaPredicted RBP25.52■■□□□ 1.68
RNF40-210ENST00000566811 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
RNF40-210ENST00000566811 CHMP4BQ9H444 224 aaKnown RBP25.52■■□□□ 1.68
RNF40-210ENST00000566811 UBTFL1P0CB47 393 aaPredicted RBP25.51■■□□□ 1.67
RNF40-210ENST00000566811 TMEM57Q8N5G2 664 aa25.51■■□□□ 1.67
RNF40-210ENST00000566811 NBPF7P0C2Y1 421 aaPredicted RBP25.5■■□□□ 1.67
RNF40-210ENST00000566811 PRPF40BQ6NWY9 871 aaKnown RBP25.49■■□□□ 1.67
RNF40-210ENST00000566811 C3orf67Q6ZVT6 689 aa25.49■■□□□ 1.67
RNF40-210ENST00000566811 ITPRIPQ8IWB1 547 aa25.49■■□□□ 1.67
RNF40-210ENST00000566811 CSF1RP07333 972 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 RRP1P56182 461 aaKnown RBP25.48■■□□□ 1.67
RNF40-210ENST00000566811 GRAPQ13588 217 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 GRIPAP1Q4V328 841 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 TTLL11Q8NHH1 800 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 GRAPLQ8TC17 118 aaPredicted RBP25.48■■□□□ 1.67
RNF40-210ENST00000566811 BCS1LQ9Y276 419 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 FER1L6Q2WGJ9 1857 aa25.48■■□□□ 1.67
RNF40-210ENST00000566811 TAF1P21675 1872 aa25.47■■□□□ 1.67
RNF40-210ENST00000566811 SPEF2Q9C093 1822 aa25.47■■□□□ 1.67
RNF40-210ENST00000566811 BBOX1O75936 387 aa25.47■■□□□ 1.67
RNF40-210ENST00000566811 CC2D2BQ6DHV5 1058 aa25.47■■□□□ 1.67
RNF40-210ENST00000566811 JARID2Q92833 1246 aaPredicted RBP25.47■■□□□ 1.67
RNF40-210ENST00000566811 CDC5LQ99459 802 aaKnown RBP25.47■■□□□ 1.67
RNF40-210ENST00000566811 DDX19BQ9UMR2 479 aa25.47■■□□□ 1.67
RNF40-210ENST00000566811 RLBP1P12271 317 aa25.46■■□□□ 1.67
RNF40-210ENST00000566811 MVPQ14764 893 aaKnown RBP25.46■■□□□ 1.67
RNF40-210ENST00000566811 RABL6Q3YEC7 729 aaPredicted RBP25.46■■□□□ 1.67
RNF40-210ENST00000566811 TMX4Q9H1E5 349 aaPredicted RBP25.46■■□□□ 1.67
RNF40-210ENST00000566811 TNNQ9UQP3 1299 aa25.46■■□□□ 1.67
RNF40-210ENST00000566811 HSPA6P17066 643 aa25.45■■□□□ 1.66
RNF40-210ENST00000566811 FOXO4P98177 505 aa25.45■■□□□ 1.66
RNF40-210ENST00000566811 SUCLG2Q96I99 432 aa25.45■■□□□ 1.66
RNF40-210ENST00000566811 MEIS3Q99687 375 aa25.45■■□□□ 1.66
RNF40-210ENST00000566811 PPEF1O14829 653 aaPredicted RBP25.44■■□□□ 1.66
RNF40-210ENST00000566811 PLIN1O60240 522 aa25.43■■□□□ 1.66
RNF40-210ENST00000566811 PANK1Q8TE04 598 aa25.43■■□□□ 1.66
RNF40-210ENST00000566811 GNAI2P04899 355 aa25.42■■□□□ 1.66
RNF40-210ENST00000566811 IFIT5Q13325 482 aaKnown RBP25.42■■□□□ 1.66
RNF40-210ENST00000566811 LMBR1LQ6UX01 489 aa25.42■■□□□ 1.66
RNF40-210ENST00000566811 KAZALD1Q96I82 304 aa25.42■■□□□ 1.66
RNF40-210ENST00000566811 BICC1Q9H694 974 aaKnown RBP25.42■■□□□ 1.66
RNF40-210ENST00000566811 GREM2Q9H772 168 aa25.42■■□□□ 1.66
RNF40-210ENST00000566811 ANKRD18BA2A2Z9 1011 aa25.41■■□□□ 1.66
RNF40-210ENST00000566811 ITGA6P23229 1130 aa25.41■■□□□ 1.66
RNF40-210ENST00000566811 CCDC57Q2TAC2 916 aa25.41■■□□□ 1.66
RNF40-210ENST00000566811 CCDC93Q567U6 631 aa25.41■■□□□ 1.66
RNF40-210ENST00000566811 ANKRD18AQ8IVF6 992 aa25.41■■□□□ 1.66
RNF40-210ENST00000566811 KIF3CO14782 793 aa25.4■■□□□ 1.66
RNF40-210ENST00000566811 RPS8P62241 208 aaKnown RBP25.4■■□□□ 1.66
RNF40-210ENST00000566811 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
RNF40-210ENST00000566811 C7orf43Q8WVR3 580 aa25.4■■□□□ 1.66
RNF40-210ENST00000566811 ATP6V0A2Q9Y487 856 aa25.4■■□□□ 1.66
RNF40-210ENST00000566811 ZBTB7BO15156 539 aaPredicted RBP25.39■■□□□ 1.66
RNF40-210ENST00000566811 IGHMBP2P38935 993 aaKnown RBP25.39■■□□□ 1.66
RNF40-210ENST00000566811 RTKN2Q8IZC4 609 aa25.39■■□□□ 1.66
RNF40-210ENST00000566811 CHMP3Q9Y3E7 222 aa25.39■■□□□ 1.66
RNF40-210ENST00000566811 LTBP1Q14766 1721 aa25.39■■□□□ 1.65
RNF40-210ENST00000566811 A0A1B0GUL6 1792 aa25.39■■□□□ 1.65
RNF40-210ENST00000566811 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
RNF40-210ENST00000566811 MTX1Q13505 466 aa25.38■■□□□ 1.65
RNF40-210ENST00000566811 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
RNF40-210ENST00000566811 SP8Q8IXZ3 490 aa25.38■■□□□ 1.65
RNF40-210ENST00000566811 ANKRD44Q8N8A2 993 aa25.38■■□□□ 1.65
RNF40-210ENST00000566811 LRRFIP2Q9Y608 721 aaKnown RBP25.38■■□□□ 1.65
RNF40-210ENST00000566811 SNED1Q8TER0 1413 aa25.37■■□□□ 1.65
RNF40-210ENST00000566811 SBF1O95248 1867 aa25.37■■□□□ 1.65
RNF40-210ENST00000566811 C21orf2O43822 256 aa25.37■■□□□ 1.65
RNF40-210ENST00000566811 CELF1Q92879 486 aaKnown RBP25.37■■□□□ 1.65
RNF40-210ENST00000566811 SEC31BQ9NQW1 1179 aa25.37■■□□□ 1.65
RNF40-210ENST00000566811 BSDC1Q9NW68 430 aaPredicted RBP25.37■■□□□ 1.65
RNF40-210ENST00000566811 COG6Q9Y2V7 657 aa25.37■■□□□ 1.65
RNF40-210ENST00000566811 DICER1Q9UPY3 1922 aaKnown RBP25.37■■□□□ 1.65
RNF40-210ENST00000566811 COL4A1P02462 1669 aa25.36■■□□□ 1.65
RNF40-210ENST00000566811 TAF7LQ5H9L4 462 aa25.36■■□□□ 1.65
RNF40-210ENST00000566811 CCDC85AQ96PX6 553 aaPredicted RBP25.36■■□□□ 1.65
RNF40-210ENST00000566811 MPHOSPH8Q99549 860 aa25.35■■□□□ 1.65
RNF40-210ENST00000566811 PSMD1Q99460 953 aa25.34■■□□□ 1.65
RNF40-210ENST00000566811 CCDC88AQ3V6T2 1871 aa25.34■■□□□ 1.65
RNF40-210ENST00000566811 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
RNF40-210ENST00000566811 AAMPQ13685 434 aa25.33■■□□□ 1.65
RNF40-210ENST00000566811 C20orf194Q5TEA3 1177 aa25.33■■□□□ 1.65
RNF40-210ENST00000566811 FBXO3Q9UK99 471 aa25.33■■□□□ 1.65
RNF40-210ENST00000566811 TAOK3Q9H2K8 898 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms