RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 HOXB7P09629 217 aa21.52■■□□□ 1.04
TSR3-202ENST00000566296 ADARB2Q9NS39 739 aaKnown RBP21.52■■□□□ 1.04
TSR3-202ENST00000566296 TMC4Q7Z404 712 aa21.51■■□□□ 1.03
TSR3-202ENST00000566296 PLBD2Q8NHP8 589 aa21.51■■□□□ 1.03
TSR3-202ENST00000566296 GPRC5DQ9NZD1 345 aa21.51■■□□□ 1.03
TSR3-202ENST00000566296 TRIM35Q9UPQ4 493 aa21.51■■□□□ 1.03
TSR3-202ENST00000566296 DDX60Q8IY21 1712 aaKnown RBP21.5■■□□□ 1.03
TSR3-202ENST00000566296 CXCL9Q07325 125 aa21.5■■□□□ 1.03
TSR3-202ENST00000566296 KIAA2012Q0VF49 1180 aa21.5■■□□□ 1.03
TSR3-202ENST00000566296 CIAPIN1Q6FI81 312 aa21.5■■□□□ 1.03
TSR3-202ENST00000566296 PAXIP1Q6ZW49 1069 aaPredicted RBP21.5■■□□□ 1.03
TSR3-202ENST00000566296 WBP1LQ9NX94 342 aa21.5■■□□□ 1.03
TSR3-202ENST00000566296 CDHR2Q9BYE9 1310 aa21.5■■□□□ 1.03
TSR3-202ENST00000566296 WDR33Q9C0J8 1336 aaKnown RBP21.5■■□□□ 1.03
TSR3-202ENST00000566296 LRRC37AA6NMS7 1700 aa21.49■■□□□ 1.03
TSR3-202ENST00000566296 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
TSR3-202ENST00000566296 TAF1P21675 1872 aa21.49■■□□□ 1.03
TSR3-202ENST00000566296 ECE1P42892 770 aa21.48■■□□□ 1.03
TSR3-202ENST00000566296 GMPSP49915 693 aaPredicted RBP21.48■■□□□ 1.03
TSR3-202ENST00000566296 MAP2K1Q02750 393 aaPredicted RBP21.48■■□□□ 1.03
TSR3-202ENST00000566296 BCL2L13Q9BXK5 485 aa21.48■■□□□ 1.03
TSR3-202ENST00000566296 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
TSR3-202ENST00000566296 TNIP1Q15025 636 aa21.47■■□□□ 1.03
TSR3-202ENST00000566296 ANKRD13DQ6ZTN6 518 aa21.47■■□□□ 1.03
TSR3-202ENST00000566296 DUOX1Q9NRD9 1551 aa21.47■■□□□ 1.03
TSR3-202ENST00000566296 TRAF5O00463 557 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 ZNF428Q96B54 188 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 ISCA1Q9BUE6 129 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 HYPKQ9NX55 129 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
TSR3-202ENST00000566296 RAD17O75943 681 aa21.45■■□□□ 1.02
TSR3-202ENST00000566296 LBX1P52954 281 aa21.45■■□□□ 1.02
TSR3-202ENST00000566296 FMR1Q06787 632 aaKnown RBP eCLIP21.45■■□□□ 1.02
TSR3-202ENST00000566296 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
TSR3-202ENST00000566296 CAPNS2Q96L46 248 aa21.45■■□□□ 1.02
TSR3-202ENST00000566296 ATP5J2-PTCD1G3V325 749 aa21.44■■□□□ 1.02
TSR3-202ENST00000566296 GRM1Q13255 1194 aa21.44■■□□□ 1.02
TSR3-202ENST00000566296 ZNF316A6NFI3 1004 aaPredicted RBP21.43■■□□□ 1.02
TSR3-202ENST00000566296 HSPA8P11142 646 aaKnown RBP21.43■■□□□ 1.02
TSR3-202ENST00000566296 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
TSR3-202ENST00000566296 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
TSR3-202ENST00000566296 FAM89AQ96GI7 184 aa21.43■■□□□ 1.02
TSR3-202ENST00000566296 BEGAINQ9BUH8 593 aa21.43■■□□□ 1.02
TSR3-202ENST00000566296 TLL2Q9Y6L7 1015 aa21.43■■□□□ 1.02
TSR3-202ENST00000566296 CELF1Q92879 486 aaKnown RBP21.42■■□□□ 1.02
TSR3-202ENST00000566296 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
TSR3-202ENST00000566296 CELF2O95319 508 aaKnown RBP21.41■■□□□ 1.02
TSR3-202ENST00000566296 CALD1Q05682 793 aaKnown RBP21.41■■□□□ 1.02
TSR3-202ENST00000566296 CST9Q5W186 159 aa21.41■■□□□ 1.02
TSR3-202ENST00000566296 CYP4F22Q6NT55 531 aa21.41■■□□□ 1.02
TSR3-202ENST00000566296 ZC3H15Q8WU90 426 aaKnown RBP21.41■■□□□ 1.02
TSR3-202ENST00000566296 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
TSR3-202ENST00000566296 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
TSR3-202ENST00000566296 YDJCA8MPS7 323 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 H7C1D1 291 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
TSR3-202ENST00000566296 HSP90B1P14625 803 aaKnown RBP21.4■■□□□ 1.02
TSR3-202ENST00000566296 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
TSR3-202ENST00000566296 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
TSR3-202ENST00000566296 IFT57Q9NWB7 429 aa21.4■■□□□ 1.02
TSR3-202ENST00000566296 CNOT7Q9UIV1 285 aaKnown RBP21.4■■□□□ 1.02
TSR3-202ENST00000566296 C6orf229H3BNL8 230 aa21.39■■□□□ 1.01
TSR3-202ENST00000566296 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
TSR3-202ENST00000566296 MICALL2Q8IY33 904 aa21.39■■□□□ 1.01
TSR3-202ENST00000566296 EYA3Q99504 573 aa21.39■■□□□ 1.01
TSR3-202ENST00000566296 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
TSR3-202ENST00000566296 GNAI1P63096 354 aa21.38■■□□□ 1.01
TSR3-202ENST00000566296 ZNF408Q9H9D4 720 aa21.38■■□□□ 1.01
TSR3-202ENST00000566296 DBNDD1Q9H9R9 158 aa21.38■■□□□ 1.01
TSR3-202ENST00000566296 PGAP2Q9UHJ9 254 aa21.38■■□□□ 1.01
TSR3-202ENST00000566296 CDC37L1Q7L3B6 337 aa21.37■■□□□ 1.01
TSR3-202ENST00000566296 SAPCD2Q86UD0 394 aa21.37■■□□□ 1.01
TSR3-202ENST00000566296 PSMD14O00487 310 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 APAF1O14727 1248 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
TSR3-202ENST00000566296 GPSM2P81274 684 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 ZBTB38Q8NAP3 1195 aaPredicted RBP21.36■■□□□ 1.01
TSR3-202ENST00000566296 DPF2Q92785 391 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 ZBTB12Q9Y330 459 aaPredicted RBP21.36■■□□□ 1.01
TSR3-202ENST00000566296 COL4A1P02462 1669 aa21.36■■□□□ 1.01
TSR3-202ENST00000566296 SHTN1A0MZ66 631 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 ECE2O60344 883 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 MAP2K2P36507 400 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 RPS8P62241 208 aaKnown RBP21.35■■□□□ 1.01
TSR3-202ENST00000566296 HHIPL1Q96JK4 782 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 MYD88Q99836 296 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 CHMP4AQ9BY43 222 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 POLLQ9UGP5 575 aa21.35■■□□□ 1.01
TSR3-202ENST00000566296 RPS12P25398 132 aaKnown RBP21.34■■□□□ 1.01
TSR3-202ENST00000566296 PHAXQ9H814 394 aaKnown RBP21.34■■□□□ 1.01
TSR3-202ENST00000566296 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
TSR3-202ENST00000566296 AOC2O75106 756 aa21.33■■□□□ 1.01
TSR3-202ENST00000566296 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1.01
TSR3-202ENST00000566296 CCDC152Q4G0S7 254 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms