RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 GRM8O00222 908 aa20.72■□□□□ 0.91
RAB40C-210ENST00000566290 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
RAB40C-210ENST00000566290 XAGE3Q8WTP9 111 aa20.72■□□□□ 0.91
RAB40C-210ENST00000566290 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
RAB40C-210ENST00000566290 AFDNP55196 1824 aaKnown RBP20.71■□□□□ 0.91
RAB40C-210ENST00000566290 POLRMTO00411 1230 aaKnown RBP20.71■□□□□ 0.91
RAB40C-210ENST00000566290 NBPF7P0C2Y1 421 aaPredicted RBP20.71■□□□□ 0.91
RAB40C-210ENST00000566290 CHRNA5P30532 468 aa20.71■□□□□ 0.91
RAB40C-210ENST00000566290 NFIXQ14938 502 aa20.71■□□□□ 0.91
RAB40C-210ENST00000566290 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
RAB40C-210ENST00000566290 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-210ENST00000566290 COPS6Q7L5N1 327 aa20.7■□□□□ 0.9
RAB40C-210ENST00000566290 RIC3Q7Z5B4 369 aa20.7■□□□□ 0.9
RAB40C-210ENST00000566290 STAP2Q9UGK3 403 aa20.7■□□□□ 0.9
RAB40C-210ENST00000566290 A0A087WZG4 1122 aa20.69■□□□□ 0.9
RAB40C-210ENST00000566290 NEURL1BA8MQ27 555 aa20.69■□□□□ 0.9
RAB40C-210ENST00000566290 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
RAB40C-210ENST00000566290 IGKV5-2P06315 115 aa20.69■□□□□ 0.9
RAB40C-210ENST00000566290 RASSF7Q02833 373 aa20.69■□□□□ 0.9
RAB40C-210ENST00000566290 SCN7AQ01118 1682 aa20.68■□□□□ 0.9
RAB40C-210ENST00000566290 FOXN1O15353 648 aa20.68■□□□□ 0.9
RAB40C-210ENST00000566290 CDC45O75419 566 aa20.68■□□□□ 0.9
RAB40C-210ENST00000566290 GCKRQ14397 625 aa20.68■□□□□ 0.9
RAB40C-210ENST00000566290 PPP1R42Q7Z4L9 355 aa20.68■□□□□ 0.9
RAB40C-210ENST00000566290 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-210ENST00000566290 GLTPD2A6NH11 291 aa20.67■□□□□ 0.9
RAB40C-210ENST00000566290 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
RAB40C-210ENST00000566290 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
RAB40C-210ENST00000566290 MKRN1Q9UHC7 482 aaKnown RBP20.67■□□□□ 0.9
RAB40C-210ENST00000566290 POTECB2RU33 542 aa20.66■□□□□ 0.9
RAB40C-210ENST00000566290 GSPT1P15170 499 aaKnown RBP20.66■□□□□ 0.9
RAB40C-210ENST00000566290 DZIP3Q86Y13 1208 aaKnown RBP20.66■□□□□ 0.9
RAB40C-210ENST00000566290 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
RAB40C-210ENST00000566290 KIF1BPQ96EK5 621 aa20.66■□□□□ 0.9
RAB40C-210ENST00000566290 BCORQ6W2J9 1755 aa20.65■□□□□ 0.9
RAB40C-210ENST00000566290 SRGAP3O43295 1099 aa20.65■□□□□ 0.9
RAB40C-210ENST00000566290 SEC24BO95487 1268 aa20.65■□□□□ 0.9
RAB40C-210ENST00000566290 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
RAB40C-210ENST00000566290 SERPINB2P05120 415 aa20.64■□□□□ 0.89
RAB40C-210ENST00000566290 MYL6BP14649 208 aa20.64■□□□□ 0.89
RAB40C-210ENST00000566290 PDE1AP54750 535 aa20.64■□□□□ 0.89
RAB40C-210ENST00000566290 CWF19L2Q2TBE0 894 aaKnown RBP20.64■□□□□ 0.89
RAB40C-210ENST00000566290 RABL6Q3YEC7 729 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-210ENST00000566290 NPM2Q86SE8 214 aaKnown RBP20.64■□□□□ 0.89
RAB40C-210ENST00000566290 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.89
RAB40C-210ENST00000566290 ZC3H4Q9UPT8 1303 aaKnown RBP20.63■□□□□ 0.89
RAB40C-210ENST00000566290 PRDM10Q9NQV6 1147 aa20.63■□□□□ 0.89
RAB40C-210ENST00000566290 EXOC6BQ9Y2D4 811 aa20.63■□□□□ 0.89
RAB40C-210ENST00000566290 ANKRD36CQ5JPF3 1778 aa20.63■□□□□ 0.89
RAB40C-210ENST00000566290 CARMIL3Q8ND23 1372 aa20.62■□□□□ 0.89
RAB40C-210ENST00000566290 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
RAB40C-210ENST00000566290 TRIM28Q13263 835 aaKnown RBP20.62■□□□□ 0.89
RAB40C-210ENST00000566290 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
RAB40C-210ENST00000566290 MX1P20591 662 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 LMNB1P20700 586 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 HLFQ16534 295 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 CCDC24Q8N4L8 307 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 RHPN1Q8TCX5 695 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 MYD88Q99836 296 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 PCDH10Q9P2E7 1040 aa20.61■□□□□ 0.89
RAB40C-210ENST00000566290 CASP7P55210 303 aa20.6■□□□□ 0.89
RAB40C-210ENST00000566290 TBC1D9Q6ZT07 1266 aa20.6■□□□□ 0.89
RAB40C-210ENST00000566290 CCDC191Q8NCU4 936 aa20.6■□□□□ 0.89
RAB40C-210ENST00000566290 SUCLG2Q96I99 432 aa20.6■□□□□ 0.89
RAB40C-210ENST00000566290 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
RAB40C-210ENST00000566290 TTC41PQ6P2S7 1318 aa20.59■□□□□ 0.89
RAB40C-210ENST00000566290 EPB41L2O43491 1005 aaKnown RBP20.59■□□□□ 0.89
RAB40C-210ENST00000566290 SURF6O75683 361 aaKnown RBP20.59■□□□□ 0.89
RAB40C-210ENST00000566290 C22orf23Q9BZE7 217 aa20.59■□□□□ 0.89
RAB40C-210ENST00000566290 H7C1W4 665 aa20.58■□□□□ 0.89
RAB40C-210ENST00000566290 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
RAB40C-210ENST00000566290 CASC1Q6TDU7 716 aa20.58■□□□□ 0.89
RAB40C-210ENST00000566290 CCDC88AQ3V6T2 1871 aa20.58■□□□□ 0.88
RAB40C-210ENST00000566290 BECN1Q14457 450 aa20.57■□□□□ 0.88
RAB40C-210ENST00000566290 PRR5LQ6MZQ0 368 aa20.57■□□□□ 0.88
RAB40C-210ENST00000566290 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-210ENST00000566290 ISCA1Q9BUE6 129 aa20.57■□□□□ 0.88
RAB40C-210ENST00000566290 BICC1Q9H694 974 aaKnown RBP20.57■□□□□ 0.88
RAB40C-210ENST00000566290 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
RAB40C-210ENST00000566290 SDSP20132 328 aa20.56■□□□□ 0.88
RAB40C-210ENST00000566290 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-210ENST00000566290 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
RAB40C-210ENST00000566290 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
RAB40C-210ENST00000566290 IL27Q8NEV9 243 aa20.56■□□□□ 0.88
RAB40C-210ENST00000566290 SETDB2Q96T68 719 aa20.56■□□□□ 0.88
RAB40C-210ENST00000566290 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-210ENST00000566290 ABHD8Q96I13 439 aa20.55■□□□□ 0.88
RAB40C-210ENST00000566290 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
RAB40C-210ENST00000566290 ANKRD31Q8N7Z5 1873 aa20.55■□□□□ 0.88
RAB40C-210ENST00000566290 MAP3K15Q6ZN16 1313 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 RGL2O15211 777 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 LBX1P52954 281 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 HSP90AB3PQ58FF7 597 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 CNTNAP1P78357 1384 aa20.54■□□□□ 0.88
RAB40C-210ENST00000566290 NFKBIEO00221 500 aa20.53■□□□□ 0.88
RAB40C-210ENST00000566290 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms