RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
MSLN-206ENST00000566269 LINS1Q8NG48 757 aa22.49■■□□□ 1.19
MSLN-206ENST00000566269 PSMD1Q99460 953 aa22.49■■□□□ 1.19
MSLN-206ENST00000566269 NMRK2Q9NPI5 230 aa22.49■■□□□ 1.19
MSLN-206ENST00000566269 GCKRQ14397 625 aa22.48■■□□□ 1.19
MSLN-206ENST00000566269 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
MSLN-206ENST00000566269 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
MSLN-206ENST00000566269 UBE3BQ7Z3V4 1068 aa22.48■■□□□ 1.19
MSLN-206ENST00000566269 TRMT2AQ8IZ69 625 aaKnown RBP22.48■■□□□ 1.19
MSLN-206ENST00000566269 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
MSLN-206ENST00000566269 MYH3P11055 1940 aa22.47■■□□□ 1.19
MSLN-206ENST00000566269 IARSP41252 1262 aaKnown RBP22.47■■□□□ 1.19
MSLN-206ENST00000566269 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
MSLN-206ENST00000566269 SSH1Q8WYL5 1049 aa22.47■■□□□ 1.19
MSLN-206ENST00000566269 CELF1Q92879 486 aaKnown RBP22.47■■□□□ 1.19
MSLN-206ENST00000566269 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
MSLN-206ENST00000566269 COL4A1P02462 1669 aa22.46■■□□□ 1.19
MSLN-206ENST00000566269 SLC4A10Q6U841 1118 aa22.46■■□□□ 1.19
MSLN-206ENST00000566269 TMC4Q7Z404 712 aa22.46■■□□□ 1.19
MSLN-206ENST00000566269 SP8Q8IXZ3 490 aa22.46■■□□□ 1.19
MSLN-206ENST00000566269 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.19
MSLN-206ENST00000566269 GLTPD2A6NH11 291 aa22.45■■□□□ 1.18
MSLN-206ENST00000566269 KIF3CO14782 793 aa22.45■■□□□ 1.18
MSLN-206ENST00000566269 CTSWP56202 376 aa22.45■■□□□ 1.18
MSLN-206ENST00000566269 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
MSLN-206ENST00000566269 SEC31BQ9NQW1 1179 aa22.45■■□□□ 1.18
MSLN-206ENST00000566269 C1QTNF8P60827 252 aa22.44■■□□□ 1.18
MSLN-206ENST00000566269 BEND3Q5T5X7 828 aa22.44■■□□□ 1.18
MSLN-206ENST00000566269 DPY19L2Q6NUT2 758 aa22.44■■□□□ 1.18
MSLN-206ENST00000566269 SMC4Q9NTJ3 1288 aa22.44■■□□□ 1.18
MSLN-206ENST00000566269 H7C1W4 665 aa22.43■■□□□ 1.18
MSLN-206ENST00000566269 ALDH1L2Q3SY69 923 aa22.43■■□□□ 1.18
MSLN-206ENST00000566269 MPNDQ8N594 471 aa22.43■■□□□ 1.18
MSLN-206ENST00000566269 JDP2Q8WYK2 163 aa22.43■■□□□ 1.18
MSLN-206ENST00000566269 RRAGCQ9HB90 399 aa22.43■■□□□ 1.18
MSLN-206ENST00000566269 CT47B1P0C2W7 299 aaPredicted RBP22.42■■□□□ 1.18
MSLN-206ENST00000566269 RPS8P62241 208 aaKnown RBP22.42■■□□□ 1.18
MSLN-206ENST00000566269 LARGE2Q8N3Y3 721 aa22.42■■□□□ 1.18
MSLN-206ENST00000566269 PTPRCP08575 1304 aa22.41■■□□□ 1.18
MSLN-206ENST00000566269 PPIP5K2O43314 1243 aa22.41■■□□□ 1.18
MSLN-206ENST00000566269 C16orf71Q8IYS4 520 aaPredicted RBP22.41■■□□□ 1.18
MSLN-206ENST00000566269 SUPT20HQ8NEM7 779 aa22.41■■□□□ 1.18
MSLN-206ENST00000566269 COL4A5P29400 1685 aa22.41■■□□□ 1.18
MSLN-206ENST00000566269 ZNF541Q9H0D2 1346 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 CASP7P55210 303 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 AOC3Q16853 763 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 TTLL11Q8NHH1 800 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 GREM2Q9H772 168 aa22.4■■□□□ 1.18
MSLN-206ENST00000566269 DUOX1Q9NRD9 1551 aa22.39■■□□□ 1.18
MSLN-206ENST00000566269 SPEF2Q9C093 1822 aa22.39■■□□□ 1.17
MSLN-206ENST00000566269 CDC5LQ99459 802 aaKnown RBP22.39■■□□□ 1.17
MSLN-206ENST00000566269 RTFDC1Q9BY42 306 aaPredicted RBP22.39■■□□□ 1.17
MSLN-206ENST00000566269 WDR90Q96KV7 1748 aa22.39■■□□□ 1.17
MSLN-206ENST00000566269 ALDH1L1O75891 902 aa22.38■■□□□ 1.17
MSLN-206ENST00000566269 DDNO94850 711 aaPredicted RBP22.38■■□□□ 1.17
MSLN-206ENST00000566269 ANKRD18AQ8IVF6 992 aa22.38■■□□□ 1.17
MSLN-206ENST00000566269 NIM1KQ8IY84 436 aa22.38■■□□□ 1.17
MSLN-206ENST00000566269 PLA2G12BQ9BX93 195 aa22.38■■□□□ 1.17
MSLN-206ENST00000566269 C9orf78Q9NZ63 289 aaPredicted RBP22.38■■□□□ 1.17
MSLN-206ENST00000566269 NSFL1CQ9UNZ2 370 aaKnown RBP22.38■■□□□ 1.17
MSLN-206ENST00000566269 GRM8O00222 908 aa22.37■■□□□ 1.17
MSLN-206ENST00000566269 RTL9Q8NET4 1388 aa22.37■■□□□ 1.17
MSLN-206ENST00000566269 FZD9O00144 591 aa22.36■■□□□ 1.17
MSLN-206ENST00000566269 VEGFAP15692 232 aaPredicted RBP22.36■■□□□ 1.17
MSLN-206ENST00000566269 EIF6P56537 245 aaKnown RBP22.36■■□□□ 1.17
MSLN-206ENST00000566269 GPSM2P81274 684 aa22.36■■□□□ 1.17
MSLN-206ENST00000566269 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
MSLN-206ENST00000566269 LTBP1Q14766 1721 aa22.35■■□□□ 1.17
MSLN-206ENST00000566269 C6orf229H3BNL8 230 aa22.35■■□□□ 1.17
MSLN-206ENST00000566269 TOMM70O94826 608 aa22.35■■□□□ 1.17
MSLN-206ENST00000566269 VPS33BQ9H267 617 aa22.35■■□□□ 1.17
MSLN-206ENST00000566269 ANKIB1Q9P2G1 1089 aa22.35■■□□□ 1.17
MSLN-206ENST00000566269 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
MSLN-206ENST00000566269 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
MSLN-206ENST00000566269 KIAA2012Q0VF49 1180 aa22.34■■□□□ 1.17
MSLN-206ENST00000566269 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
MSLN-206ENST00000566269 ITGA6P23229 1130 aa22.33■■□□□ 1.17
MSLN-206ENST00000566269 GJA3Q9Y6H8 435 aa22.33■■□□□ 1.17
MSLN-206ENST00000566269 UFL1O94874 794 aa22.32■■□□□ 1.16
MSLN-206ENST00000566269 IGHMBP2P38935 993 aaKnown RBP22.32■■□□□ 1.16
MSLN-206ENST00000566269 GPR101Q96P66 508 aaPredicted RBP22.32■■□□□ 1.16
MSLN-206ENST00000566269 POLLQ9UGP5 575 aa22.32■■□□□ 1.16
MSLN-206ENST00000566269 NOB1Q9ULX3 412 aaKnown RBP22.32■■□□□ 1.16
MSLN-206ENST00000566269 POTECB2RU33 542 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 RIMBP2O15034 1052 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 CSF1RP07333 972 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 FOXO4P98177 505 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 WASHC4Q2M389 1173 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 GPC2Q8N158 579 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 TBC1D16Q8TBP0 767 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 RBM46Q8TBY0 533 aaKnown RBP22.31■■□□□ 1.16
MSLN-206ENST00000566269 L3MBTL3Q96JM7 780 aaPredicted RBP22.31■■□□□ 1.16
MSLN-206ENST00000566269 EYA3Q99504 573 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 GGA1Q9UJY5 639 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 XDHP47989 1333 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 KIF16BQ96L93 1317 aa22.31■■□□□ 1.16
MSLN-206ENST00000566269 SCN4AP35499 1836 aa22.3■■□□□ 1.16
MSLN-206ENST00000566269 IQCA1LA6NCM1 817 aa22.3■■□□□ 1.16
MSLN-206ENST00000566269 EPHA10Q5JZY3 1008 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms