RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 GPTP24298 496 aa12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
TUBGCP4-211ENST00000566251 AOX1Q06278 1338 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 GNPATO15228 680 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 TRIM37O94972 964 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 IFIT2P09913 472 aaKnown RBP12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 ANP32AP39687 249 aaKnown RBP12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 FOXO4P98177 505 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
TUBGCP4-211ENST00000566251 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 ERC2O15083 957 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 PDE8AO60658 829 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 MX1P20591 662 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 RFC4P35249 363 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 PDE1AP54750 535 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 EP400Q96L91 3159 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 BTAF1O14981 1849 aa12.14□□□□□ -0.47
TUBGCP4-211ENST00000566251 SH3TC1Q8TE82 1336 aa12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
TUBGCP4-211ENST00000566251 TTC41PQ6P2S7 1318 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 PLSCR1O15162 318 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 CDC45O75419 566 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 CIAO1O76071 339 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 CSF1RP07333 972 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 RREB1Q92766 1687 aa12.12□□□□□ -0.47
TUBGCP4-211ENST00000566251 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
TUBGCP4-211ENST00000566251 APBA3O96018 575 aa12.11□□□□□ -0.47
TUBGCP4-211ENST00000566251 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
TUBGCP4-211ENST00000566251 KCNQ4P56696 695 aa12.11□□□□□ -0.47
TUBGCP4-211ENST00000566251 SIL1Q9H173 461 aa12.11□□□□□ -0.47
TUBGCP4-211ENST00000566251 EYA2O00167 538 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 GLRX3O76003 335 aaKnown RBP12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 CTSWP56202 376 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 SUSD4Q5VX71 490 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 AACSQ86V21 672 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 FLAD1Q8NFF5 587 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 CEP126Q9P2H0 1117 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 AKAP2Q9Y2D5 859 aa12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
TUBGCP4-211ENST00000566251 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 SASH1O94885 1247 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 SSFA2P28290 1259 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 USPL1Q5W0Q7 1092 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 OTUD7AQ8TE49 926 aaPredicted RBP12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 UBN2Q6ZU65 1347 aa12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
TUBGCP4-211ENST00000566251 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 FAM177BA6PVY3 158 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 NPHP1O15259 732 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 SDSP20132 328 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 MFRPQ9BY79 579 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 LY75O60449 1722 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 SALL3Q9BXA9 1300 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 LRP5O75197 1615 aa12.08□□□□□ -0.48
TUBGCP4-211ENST00000566251 NUP98P52948 1817 aa12.07□□□□□ -0.48
TUBGCP4-211ENST00000566251 NTSR2O95665 410 aa12.07□□□□□ -0.48
TUBGCP4-211ENST00000566251 ITGA6P23229 1130 aa12.07□□□□□ -0.48
TUBGCP4-211ENST00000566251 TFCP2Q12800 502 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms