RNA–Protein interactions for RNA: ENST00000566055.5

SIRPB1-212, Transcript of signal regulatory protein beta 1, humanhuman

TSL 3

Gene SIRPB1, Length 928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-212ENST00000566055 IBTKQ9P2D0 1353 aaPredicted RBP15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 DDR1Q08345 913 aa15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 NEXNQ0ZGT2 675 aa15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 BEND3Q5T5X7 828 aa15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.08
SIRPB1-212ENST00000566055 LAMB4A4D0S4 1761 aa15.52■□□□□ 0.07
SIRPB1-212ENST00000566055 C4AP0C0L4 1744 aa15.51■□□□□ 0.07
SIRPB1-212ENST00000566055 PRELPP51888 382 aa15.51■□□□□ 0.07
SIRPB1-212ENST00000566055 ATP8B2P98198 1209 aa15.51■□□□□ 0.07
SIRPB1-212ENST00000566055 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
SIRPB1-212ENST00000566055 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
SIRPB1-212ENST00000566055 MYH14Q7Z406 1995 aaKnown RBP15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 SMC1BQ8NDV3 1235 aa15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 USP44Q9H0E7 712 aa15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 LRRFIP2Q9Y608 721 aaKnown RBP15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
SIRPB1-212ENST00000566055 RASSF7Q02833 373 aa15.49■□□□□ 0.07
SIRPB1-212ENST00000566055 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
SIRPB1-212ENST00000566055 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
SIRPB1-212ENST00000566055 LINS1Q8NG48 757 aa15.49■□□□□ 0.07
SIRPB1-212ENST00000566055 C9orf78Q9NZ63 289 aaPredicted RBP15.49■□□□□ 0.07
SIRPB1-212ENST00000566055 RAB11FIP3O75154 756 aa15.48■□□□□ 0.07
SIRPB1-212ENST00000566055 ANXA1P04083 346 aa15.48■□□□□ 0.07
SIRPB1-212ENST00000566055 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
SIRPB1-212ENST00000566055 STK24Q9Y6E0 443 aa15.48■□□□□ 0.07
SIRPB1-212ENST00000566055 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 ZNF467Q7Z7K2 595 aaPredicted RBP15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
SIRPB1-212ENST00000566055 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 CDC45O75419 566 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 MYL6BP14649 208 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 TM4SF1P30408 202 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 BECN1Q14457 450 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 PDIA6Q15084 440 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 TEX13AQ9BXU3 409 aaPredicted RBP15.46■□□□□ 0.07
SIRPB1-212ENST00000566055 UBR2Q8IWV8 1755 aa15.45■□□□□ 0.06
SIRPB1-212ENST00000566055 TTC22Q5TAA0 569 aa15.45■□□□□ 0.06
SIRPB1-212ENST00000566055 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
SIRPB1-212ENST00000566055 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
SIRPB1-212ENST00000566055 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
SIRPB1-212ENST00000566055 SBF1O95248 1867 aa15.44■□□□□ 0.06
SIRPB1-212ENST00000566055 GRM8O00222 908 aa15.44■□□□□ 0.06
SIRPB1-212ENST00000566055 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
SIRPB1-212ENST00000566055 USPL1Q5W0Q7 1092 aa15.44■□□□□ 0.06
SIRPB1-212ENST00000566055 TBC1D32Q96NH3 1257 aa15.44■□□□□ 0.06
SIRPB1-212ENST00000566055 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 GLTPD2A6NH11 291 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 APBB1O00213 710 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 MFAP1P55081 439 aaKnown RBP15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 MTX1Q13505 466 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 ANKRD13DQ6ZTN6 518 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 COPS6Q7L5N1 327 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 METTL22Q9BUU2 404 aaPredicted RBP15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 EXOC6BQ9Y2D4 811 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 USP16Q9Y5T5 823 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 UTYO14607 1347 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 AOX1Q06278 1338 aa15.43■□□□□ 0.06
SIRPB1-212ENST00000566055 ZPR1O75312 459 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 NBPF7P0C2Y1 421 aaPredicted RBP15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 LMNB1P20700 586 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 ERC1Q8IUD2 1116 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 PLBD2Q8NHP8 589 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 OSBPL3Q9H4L5 887 aa15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 RYDENQ9NUL5 291 aaKnown RBP15.42■□□□□ 0.06
SIRPB1-212ENST00000566055 ZNF831Q5JPB2 1677 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 POTECB2RU33 542 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 NFIXQ14938 502 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 DNAJC10Q8IXB1 793 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 C22orf23Q9BZE7 217 aa15.41■□□□□ 0.06
SIRPB1-212ENST00000566055 NEURL1BA8MQ27 555 aa15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 SMARCA5O60264 1052 aaPredicted RBP15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 SEC24BO95487 1268 aa15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 OS9Q13438 667 aaPredicted RBP15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 CWF19L2Q2TBE0 894 aaKnown RBP15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 MYD88Q99836 296 aa15.4■□□□□ 0.06
SIRPB1-212ENST00000566055 TNRC6CQ9HCJ0 1690 aaKnown RBP15.39■□□□□ 0.05
SIRPB1-212ENST00000566055 STARD3NLO95772 234 aa15.39■□□□□ 0.05
SIRPB1-212ENST00000566055 MX1P20591 662 aa15.39■□□□□ 0.05
SIRPB1-212ENST00000566055 TTLL6Q8N841 843 aa15.39■□□□□ 0.05
SIRPB1-212ENST00000566055 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
SIRPB1-212ENST00000566055 NFKBIEO00221 500 aa15.38■□□□□ 0.05
SIRPB1-212ENST00000566055 SERPINB2P05120 415 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms