RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 RBM17Q96I25 401 aaKnown RBP20.92■□□□□ 0.94
RNF40-207ENST00000565931 CCDC85AQ96PX6 553 aaPredicted RBP20.92■□□□□ 0.94
RNF40-207ENST00000565931 CRAMP1Q96RY5 1269 aa20.92■□□□□ 0.94
RNF40-207ENST00000565931 PIM2Q9P1W9 311 aa20.92■□□□□ 0.94
RNF40-207ENST00000565931 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
RNF40-207ENST00000565931 HDAC5Q9UQL6 1122 aa20.92■□□□□ 0.94
RNF40-207ENST00000565931 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
RNF40-207ENST00000565931 CENPBP07199 599 aaPredicted RBP20.91■□□□□ 0.94
RNF40-207ENST00000565931 RABL6Q3YEC7 729 aaPredicted RBP20.91■□□□□ 0.94
RNF40-207ENST00000565931 LMBR1LQ6UX01 489 aa20.91■□□□□ 0.94
RNF40-207ENST00000565931 ANKRD44Q8N8A2 993 aa20.91■□□□□ 0.94
RNF40-207ENST00000565931 CNKSR1Q969H4 720 aa20.91■□□□□ 0.94
RNF40-207ENST00000565931 BICC1Q9H694 974 aaKnown RBP20.91■□□□□ 0.94
RNF40-207ENST00000565931 LRRFIP2Q9Y608 721 aaKnown RBP20.91■□□□□ 0.94
RNF40-207ENST00000565931 DDX46Q7L014 1031 aaKnown RBP20.9■□□□□ 0.94
RNF40-207ENST00000565931 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
RNF40-207ENST00000565931 GREM2Q9H772 168 aa20.9■□□□□ 0.94
RNF40-207ENST00000565931 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
RNF40-207ENST00000565931 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 GNAI2P04899 355 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 ALDH1B1P30837 517 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 SEC31BQ9NQW1 1179 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 WWC3Q9ULE0 1092 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 KIAA1551Q9HCM1 1747 aa20.89■□□□□ 0.93
RNF40-207ENST00000565931 DDX60Q8IY21 1712 aaKnown RBP20.88■□□□□ 0.93
RNF40-207ENST00000565931 GRAPQ13588 217 aa20.88■□□□□ 0.93
RNF40-207ENST00000565931 FAM161AQ3B820 660 aa20.88■□□□□ 0.93
RNF40-207ENST00000565931 GRAPLQ8TC17 118 aaPredicted RBP20.88■□□□□ 0.93
RNF40-207ENST00000565931 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
RNF40-207ENST00000565931 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
RNF40-207ENST00000565931 CRBNQ96SW2 442 aa20.87■□□□□ 0.93
RNF40-207ENST00000565931 CHMP4BQ9H444 224 aaKnown RBP20.87■□□□□ 0.93
RNF40-207ENST00000565931 ZBTB40Q9NUA8 1239 aa20.87■□□□□ 0.93
RNF40-207ENST00000565931 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
RNF40-207ENST00000565931 ITGA6P23229 1130 aa20.86■□□□□ 0.93
RNF40-207ENST00000565931 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
RNF40-207ENST00000565931 CHMP3Q9Y3E7 222 aa20.86■□□□□ 0.93
RNF40-207ENST00000565931 BBOX1O75936 387 aa20.85■□□□□ 0.93
RNF40-207ENST00000565931 RPS8P62241 208 aaKnown RBP20.85■□□□□ 0.93
RNF40-207ENST00000565931 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
RNF40-207ENST00000565931 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
RNF40-207ENST00000565931 LAMB2P55268 1798 aa20.85■□□□□ 0.93
RNF40-207ENST00000565931 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
RNF40-207ENST00000565931 ANKRD18BA2A2Z9 1011 aa20.84■□□□□ 0.93
RNF40-207ENST00000565931 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
RNF40-207ENST00000565931 MTX1Q13505 466 aa20.84■□□□□ 0.93
RNF40-207ENST00000565931 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
RNF40-207ENST00000565931 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
RNF40-207ENST00000565931 CCDC57Q2TAC2 916 aa20.83■□□□□ 0.93
RNF40-207ENST00000565931 ANKRD18AQ8IVF6 992 aa20.83■□□□□ 0.93
RNF40-207ENST00000565931 PPEF1O14829 653 aaPredicted RBP20.82■□□□□ 0.92
RNF40-207ENST00000565931 YBX3P16989 372 aaKnown RBP eCLIP20.82■□□□□ 0.92
RNF40-207ENST00000565931 C21orf2O43822 256 aa20.81■□□□□ 0.92
RNF40-207ENST00000565931 RFX5P48382 616 aaPredicted RBP20.81■□□□□ 0.92
RNF40-207ENST00000565931 TMC4Q7Z404 712 aa20.81■□□□□ 0.92
RNF40-207ENST00000565931 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
RNF40-207ENST00000565931 ZNF219Q9P2Y4 722 aaPredicted RBP20.81■□□□□ 0.92
RNF40-207ENST00000565931 ATP6V0A2Q9Y487 856 aa20.81■□□□□ 0.92
RNF40-207ENST00000565931 IGHMBP2P38935 993 aaKnown RBP20.8■□□□□ 0.92
RNF40-207ENST00000565931 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
RNF40-207ENST00000565931 SLC51AQ86UW1 340 aa20.8■□□□□ 0.92
RNF40-207ENST00000565931 SP8Q8IXZ3 490 aa20.8■□□□□ 0.92
RNF40-207ENST00000565931 ZNF594Q96JF6 807 aaPredicted RBP20.8■□□□□ 0.92
RNF40-207ENST00000565931 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 GPR162Q16538 588 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 TAF7LQ5H9L4 462 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
RNF40-207ENST00000565931 COL4A1P02462 1669 aa20.79■□□□□ 0.92
RNF40-207ENST00000565931 DLEC1Q9Y238 1755 aa20.78■□□□□ 0.92
RNF40-207ENST00000565931 PNMA6EA0A0J9YXQ4 647 aa20.78■□□□□ 0.92
RNF40-207ENST00000565931 IRX6P78412 446 aaPredicted RBP20.78■□□□□ 0.92
RNF40-207ENST00000565931 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
RNF40-207ENST00000565931 EXOC6Q8TAG9 804 aa20.78■□□□□ 0.92
RNF40-207ENST00000565931 MPHOSPH8Q99549 860 aa20.78■□□□□ 0.92
RNF40-207ENST00000565931 PTPN12Q05209 780 aaKnown RBP20.77■□□□□ 0.92
RNF40-207ENST00000565931 POLA2Q14181 598 aa20.77■□□□□ 0.92
RNF40-207ENST00000565931 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.92
RNF40-207ENST00000565931 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
RNF40-207ENST00000565931 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
RNF40-207ENST00000565931 SOGA3Q5TF21 947 aa20.76■□□□□ 0.91
RNF40-207ENST00000565931 LDHAL6AQ6ZMR3 332 aa20.76■□□□□ 0.91
RNF40-207ENST00000565931 SSH3Q8TE77 659 aa20.76■□□□□ 0.91
RNF40-207ENST00000565931 COPRSQ9NQ92 184 aa20.76■□□□□ 0.91
RNF40-207ENST00000565931 SIRT2Q8IXJ6 389 aa20.75■□□□□ 0.91
RNF40-207ENST00000565931 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
RNF40-207ENST00000565931 TMX4Q9H1E5 349 aaPredicted RBP20.75■□□□□ 0.91
RNF40-207ENST00000565931 MINPP1Q9UNW1 487 aa20.75■□□□□ 0.91
RNF40-207ENST00000565931 SLX4Q8IY92 1834 aa20.74■□□□□ 0.91
RNF40-207ENST00000565931 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
RNF40-207ENST00000565931 AAMPQ13685 434 aa20.74■□□□□ 0.91
RNF40-207ENST00000565931 PA2G4Q9UQ80 394 aaKnown RBP20.74■□□□□ 0.91
RNF40-207ENST00000565931 BRCA1P38398 1863 aaKnown RBP20.73■□□□□ 0.91
RNF40-207ENST00000565931 SNED1Q8TER0 1413 aa20.73■□□□□ 0.91
RNF40-207ENST00000565931 EYA2O00167 538 aa20.73■□□□□ 0.91
RNF40-207ENST00000565931 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
RNF40-207ENST00000565931 LRRC24Q50LG9 513 aa20.73■□□□□ 0.91
RNF40-207ENST00000565931 ARHGAP27Q6ZUM4 889 aa20.73■□□□□ 0.91
RNF40-207ENST00000565931 RTKN2Q8IZC4 609 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms