RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 PLEKHM2Q8IWE5 1019 aa22.79■■□□□ 1.24
EDC3-208ENST00000565602 IRS4O14654 1257 aaPredicted RBP22.79■■□□□ 1.24
EDC3-208ENST00000565602 RABL6Q3YEC7 729 aaPredicted RBP22.79■■□□□ 1.24
EDC3-208ENST00000565602 SLC16A10Q8TF71 515 aa22.79■■□□□ 1.24
EDC3-208ENST00000565602 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
EDC3-208ENST00000565602 APBB1O00213 710 aa22.78■■□□□ 1.24
EDC3-208ENST00000565602 SERPINB2P05120 415 aa22.78■■□□□ 1.24
EDC3-208ENST00000565602 MMP10P09238 476 aa22.78■■□□□ 1.24
EDC3-208ENST00000565602 MTX1Q13505 466 aa22.78■■□□□ 1.24
EDC3-208ENST00000565602 HDAC5Q9UQL6 1122 aa22.78■■□□□ 1.24
EDC3-208ENST00000565602 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
EDC3-208ENST00000565602 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
EDC3-208ENST00000565602 SLC10A5Q5PT55 438 aa22.77■■□□□ 1.24
EDC3-208ENST00000565602 PRR5LQ6MZQ0 368 aa22.77■■□□□ 1.24
EDC3-208ENST00000565602 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
EDC3-208ENST00000565602 SSH3Q8TE77 659 aa22.77■■□□□ 1.24
EDC3-208ENST00000565602 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
EDC3-208ENST00000565602 PSDA5PKW4 1024 aaPredicted RBP22.76■■□□□ 1.23
EDC3-208ENST00000565602 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 RIC1Q4ADV7 1423 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 PDE8AO60658 829 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 POLA2Q14181 598 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 TTC22Q5TAA0 569 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 C16orf71Q8IYS4 520 aaPredicted RBP22.75■■□□□ 1.23
EDC3-208ENST00000565602 CNBD1Q8NA66 436 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 TBC1D32Q96NH3 1257 aa22.75■■□□□ 1.23
EDC3-208ENST00000565602 CSF1RP07333 972 aa22.74■■□□□ 1.23
EDC3-208ENST00000565602 LMBR1LQ6UX01 489 aa22.74■■□□□ 1.23
EDC3-208ENST00000565602 C3orf67Q6ZVT6 689 aa22.74■■□□□ 1.23
EDC3-208ENST00000565602 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
EDC3-208ENST00000565602 CTSWP56202 376 aa22.73■■□□□ 1.23
EDC3-208ENST00000565602 TAF1P21675 1872 aa22.73■■□□□ 1.23
EDC3-208ENST00000565602 GSPT1P15170 499 aaKnown RBP22.73■■□□□ 1.23
EDC3-208ENST00000565602 TTLL11Q8NHH1 800 aa22.73■■□□□ 1.23
EDC3-208ENST00000565602 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
EDC3-208ENST00000565602 COL4A1P02462 1669 aa22.72■■□□□ 1.23
EDC3-208ENST00000565602 ZBTB7AO95365 584 aa22.72■■□□□ 1.23
EDC3-208ENST00000565602 GTF2E1P29083 439 aaPredicted RBP22.72■■□□□ 1.23
EDC3-208ENST00000565602 PARP3Q9Y6F1 533 aa22.72■■□□□ 1.23
EDC3-208ENST00000565602 SRGAP3O43295 1099 aa22.71■■□□□ 1.23
EDC3-208ENST00000565602 MFAP1P55081 439 aaKnown RBP22.71■■□□□ 1.23
EDC3-208ENST00000565602 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
EDC3-208ENST00000565602 COL11A2P13942 1736 aaPredicted RBP22.71■■□□□ 1.23
EDC3-208ENST00000565602 RFX5P48382 616 aaPredicted RBP22.71■■□□□ 1.23
EDC3-208ENST00000565602 MTFR1LQ9H019 292 aa22.71■■□□□ 1.23
EDC3-208ENST00000565602 SPEF2Q9C093 1822 aa22.7■■□□□ 1.23
EDC3-208ENST00000565602 KIF13BQ9NQT8 1826 aa22.7■■□□□ 1.23
EDC3-208ENST00000565602 RAB11FIP3O75154 756 aa22.69■■□□□ 1.22
EDC3-208ENST00000565602 CDC45O75419 566 aa22.69■■□□□ 1.22
EDC3-208ENST00000565602 HSP90B1P14625 803 aaKnown RBP22.68■■□□□ 1.22
EDC3-208ENST00000565602 ST5P78524 1137 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
EDC3-208ENST00000565602 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
EDC3-208ENST00000565602 OSBPL3Q9H4L5 887 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 GREM2Q9H772 168 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 AK9Q5TCS8 1911 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 LRP5O75197 1615 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 RTL9Q8NET4 1388 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 NPHP1O15259 732 aa22.68■■□□□ 1.22
EDC3-208ENST00000565602 TBC1D9Q6ZT07 1266 aa22.67■■□□□ 1.22
EDC3-208ENST00000565602 ATF5Q9Y2D1 282 aaPredicted RBP22.67■■□□□ 1.22
EDC3-208ENST00000565602 SURF6O75683 361 aaKnown RBP22.66■■□□□ 1.22
EDC3-208ENST00000565602 SGIP1Q9BQI5 828 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 C22orf23Q9BZE7 217 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 CHMP3Q9Y3E7 222 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 SOCS7O14512 581 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 PDE1AP54750 535 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 KLHDC4Q8TBB5 520 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 NLRP3Q96P20 1036 aa22.66■■□□□ 1.22
EDC3-208ENST00000565602 C10orf71Q711Q0 1435 aa22.65■■□□□ 1.22
EDC3-208ENST00000565602 PTPN12Q05209 780 aaKnown RBP22.65■■□□□ 1.22
EDC3-208ENST00000565602 HSP90AB4PQ58FF6 505 aa22.65■■□□□ 1.22
EDC3-208ENST00000565602 ANP32EQ9BTT0 268 aa22.65■■□□□ 1.22
EDC3-208ENST00000565602 PA2G4Q9UQ80 394 aaKnown RBP22.65■■□□□ 1.22
EDC3-208ENST00000565602 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.22
EDC3-208ENST00000565602 CRY2Q49AN0 593 aa22.64■■□□□ 1.22
EDC3-208ENST00000565602 CCDC152Q4G0S7 254 aa22.64■■□□□ 1.22
EDC3-208ENST00000565602 DAXXQ9UER7 740 aaPredicted RBP22.64■■□□□ 1.22
EDC3-208ENST00000565602 KIAA1551Q9HCM1 1747 aa22.64■■□□□ 1.22
EDC3-208ENST00000565602 MX1P20591 662 aa22.64■■□□□ 1.21
EDC3-208ENST00000565602 ITGA6P23229 1130 aa22.64■■□□□ 1.21
EDC3-208ENST00000565602 BRIP1Q9BX63 1249 aa22.64■■□□□ 1.21
EDC3-208ENST00000565602 COPRSQ9NQ92 184 aa22.64■■□□□ 1.21
EDC3-208ENST00000565602 SEC31BQ9NQW1 1179 aa22.64■■□□□ 1.21
EDC3-208ENST00000565602 DLEC1Q9Y238 1755 aa22.63■■□□□ 1.21
EDC3-208ENST00000565602 KIF1BPQ96EK5 621 aa22.63■■□□□ 1.21
EDC3-208ENST00000565602 A0A1B0GUL6 1792 aa22.63■■□□□ 1.21
EDC3-208ENST00000565602 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
EDC3-208ENST00000565602 PTGER2P43116 358 aa22.62■■□□□ 1.21
EDC3-208ENST00000565602 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
EDC3-208ENST00000565602 ZNF594Q96JF6 807 aaPredicted RBP22.62■■□□□ 1.21
EDC3-208ENST00000565602 AOX1Q06278 1338 aa22.62■■□□□ 1.21
EDC3-208ENST00000565602 SDSP20132 328 aa22.62■■□□□ 1.21
EDC3-208ENST00000565602 IFIT5Q13325 482 aaKnown RBP22.62■■□□□ 1.21
EDC3-208ENST00000565602 CCDC57Q2TAC2 916 aa22.62■■□□□ 1.21
EDC3-208ENST00000565602 CACNA1SQ13698 1873 aa22.61■■□□□ 1.21
EDC3-208ENST00000565602 ANKRD18BA2A2Z9 1011 aa22.6■■□□□ 1.21
EDC3-208ENST00000565602 STAP2Q9UGK3 403 aa22.6■■□□□ 1.21
EDC3-208ENST00000565602 IL1RAPL2Q9NP60 686 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms