RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 FAM9BQ8IZU0 186 aa24.53■■□□□ 1.52
SPSB3-207ENST00000565550 GRAPLQ8TC17 118 aaPredicted RBP24.53■■□□□ 1.52
SPSB3-207ENST00000565550 HYPKQ9NX55 129 aa24.53■■□□□ 1.52
SPSB3-207ENST00000565550 ADAMTSL1Q8N6G6 1762 aa24.52■■□□□ 1.52
SPSB3-207ENST00000565550 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
SPSB3-207ENST00000565550 DIEXFQ68CQ4 756 aaKnown RBP24.52■■□□□ 1.52
SPSB3-207ENST00000565550 FAM89AQ96GI7 184 aa24.52■■□□□ 1.52
SPSB3-207ENST00000565550 ZNRF3Q9ULT6 936 aa24.52■■□□□ 1.52
SPSB3-207ENST00000565550 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
SPSB3-207ENST00000565550 TNS4Q8IZW8 715 aa24.51■■□□□ 1.51
SPSB3-207ENST00000565550 VEGFBP49765 207 aa24.5■■□□□ 1.51
SPSB3-207ENST00000565550 CXCL9Q07325 125 aa24.5■■□□□ 1.51
SPSB3-207ENST00000565550 LTBP1Q14766 1721 aa24.49■■□□□ 1.51
SPSB3-207ENST00000565550 ELL2O00472 640 aaPredicted RBP24.49■■□□□ 1.51
SPSB3-207ENST00000565550 KIAA2012Q0VF49 1180 aa24.49■■□□□ 1.51
SPSB3-207ENST00000565550 USP50Q70EL3 339 aaPredicted RBP24.49■■□□□ 1.51
SPSB3-207ENST00000565550 IFT57Q9NWB7 429 aa24.49■■□□□ 1.51
SPSB3-207ENST00000565550 GNAI1P63096 354 aa24.48■■□□□ 1.51
SPSB3-207ENST00000565550 SF3B3Q15393 1217 aaKnown RBP24.48■■□□□ 1.51
SPSB3-207ENST00000565550 RTL5Q5HYW3 569 aaPredicted RBP24.48■■□□□ 1.51
SPSB3-207ENST00000565550 LAMB2P55268 1798 aa24.47■■□□□ 1.51
SPSB3-207ENST00000565550 CALD1Q05682 793 aaKnown RBP24.47■■□□□ 1.51
SPSB3-207ENST00000565550 TMC4Q7Z404 712 aa24.47■■□□□ 1.51
SPSB3-207ENST00000565550 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
SPSB3-207ENST00000565550 GPRC5DQ9NZD1 345 aa24.47■■□□□ 1.51
SPSB3-207ENST00000565550 FMR1Q06787 632 aaKnown RBP eCLIP24.46■■□□□ 1.51
SPSB3-207ENST00000565550 TRIM28Q13263 835 aaKnown RBP24.46■■□□□ 1.51
SPSB3-207ENST00000565550 DEFB115Q30KQ5 88 aa24.46■■□□□ 1.51
SPSB3-207ENST00000565550 CIAPIN1Q6FI81 312 aa24.46■■□□□ 1.51
SPSB3-207ENST00000565550 CELF1Q92879 486 aaKnown RBP24.46■■□□□ 1.51
SPSB3-207ENST00000565550 PHAXQ9H814 394 aaKnown RBP24.46■■□□□ 1.51
SPSB3-207ENST00000565550 RASSF10A6NK89 507 aa24.45■■□□□ 1.5
SPSB3-207ENST00000565550 RAD17O75943 681 aa24.45■■□□□ 1.5
SPSB3-207ENST00000565550 GMPSP49915 693 aaPredicted RBP24.45■■□□□ 1.5
SPSB3-207ENST00000565550 ADARB2Q9NS39 739 aaKnown RBP24.45■■□□□ 1.5
SPSB3-207ENST00000565550 IRS4O14654 1257 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-207ENST00000565550 GOLGA2Q08379 1002 aa24.44■■□□□ 1.5
SPSB3-207ENST00000565550 MIER1Q8N108 512 aa24.44■■□□□ 1.5
SPSB3-207ENST00000565550 C8orf58Q8NAV2 365 aa24.44■■□□□ 1.5
SPSB3-207ENST00000565550 ABT1Q9ULW3 272 aaKnown RBP24.44■■□□□ 1.5
SPSB3-207ENST00000565550 SALL2Q9Y467 1007 aaPredicted RBP24.44■■□□□ 1.5
SPSB3-207ENST00000565550 FOXN1O15353 648 aa24.43■■□□□ 1.5
SPSB3-207ENST00000565550 NSFL1CQ9UNZ2 370 aaKnown RBP24.43■■□□□ 1.5
SPSB3-207ENST00000565550 YDJCA8MPS7 323 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 TRAF5O00463 557 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 CAPN15O75808 1086 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 TNIP1Q15025 636 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 BCL2L13Q9BXK5 485 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 TAF1P21675 1872 aa24.42■■□□□ 1.5
SPSB3-207ENST00000565550 ZBTB38Q8NAP3 1195 aaPredicted RBP24.41■■□□□ 1.5
SPSB3-207ENST00000565550 MYD88Q99836 296 aa24.41■■□□□ 1.5
SPSB3-207ENST00000565550 WASHC4Q2M389 1173 aa24.4■■□□□ 1.5
SPSB3-207ENST00000565550 DDX60Q8IY21 1712 aaKnown RBP24.4■■□□□ 1.5
SPSB3-207ENST00000565550 RIMBP2O15034 1052 aa24.39■■□□□ 1.49
SPSB3-207ENST00000565550 GPSM2P81274 684 aa24.39■■□□□ 1.49
SPSB3-207ENST00000565550 CST9Q5W186 159 aa24.39■■□□□ 1.49
SPSB3-207ENST00000565550 AIDAQ96BJ3 306 aa24.39■■□□□ 1.49
SPSB3-207ENST00000565550 POLLQ9UGP5 575 aa24.39■■□□□ 1.49
SPSB3-207ENST00000565550 WDR33Q9C0J8 1336 aaKnown RBP24.38■■□□□ 1.49
SPSB3-207ENST00000565550 C6orf229H3BNL8 230 aa24.38■■□□□ 1.49
SPSB3-207ENST00000565550 RPS8P62241 208 aaKnown RBP24.38■■□□□ 1.49
SPSB3-207ENST00000565550 WBP1LQ9NX94 342 aa24.38■■□□□ 1.49
SPSB3-207ENST00000565550 DUOX1Q9NRD9 1551 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 CDHR2Q9BYE9 1310 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 CCER2I3L3R5 266 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 HIRAP54198 1017 aaPredicted RBP24.37■■□□□ 1.49
SPSB3-207ENST00000565550 CCDC30Q5VVM6 783 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 TSPYL6Q8N831 410 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 DBNDD1Q9H9R9 158 aa24.37■■□□□ 1.49
SPSB3-207ENST00000565550 CNOT7Q9UIV1 285 aaKnown RBP24.37■■□□□ 1.49
SPSB3-207ENST00000565550 SHTN1A0MZ66 631 aa24.36■■□□□ 1.49
SPSB3-207ENST00000565550 CTCFP49711 727 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-207ENST00000565550 JARID2Q92833 1246 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-207ENST00000565550 SEC31BQ9NQW1 1179 aa24.36■■□□□ 1.49
SPSB3-207ENST00000565550 PGAP2Q9UHJ9 254 aa24.36■■□□□ 1.49
SPSB3-207ENST00000565550 ZBTB12Q9Y330 459 aaPredicted RBP24.36■■□□□ 1.49
SPSB3-207ENST00000565550 COL4A1P02462 1669 aa24.35■■□□□ 1.49
SPSB3-207ENST00000565550 DDX58O95786 925 aaKnown RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 PCCAP05165 728 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 PAXIP1Q6ZW49 1069 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 WWC1Q8IX03 1113 aa24.35■■□□□ 1.49
SPSB3-207ENST00000565550 TRPM4Q8TD43 1214 aa24.35■■□□□ 1.49
SPSB3-207ENST00000565550 METTL22Q9BUU2 404 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 CHMP4AQ9BY43 222 aa24.35■■□□□ 1.49
SPSB3-207ENST00000565550 GLIS2Q9BZE0 524 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 CWC25Q9NXE8 425 aaPredicted RBP24.35■■□□□ 1.49
SPSB3-207ENST00000565550 H7C1D1 291 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 PSMD14O00487 310 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 DOK7Q18PE1 504 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 TBC1D16Q8TBP0 767 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 ZC3H15Q8WU90 426 aaKnown RBP24.34■■□□□ 1.49
SPSB3-207ENST00000565550 TSR2Q969E8 191 aaKnown RBP24.34■■□□□ 1.49
SPSB3-207ENST00000565550 GPR101Q96P66 508 aaPredicted RBP24.34■■□□□ 1.49
SPSB3-207ENST00000565550 PRDM10Q9NQV6 1147 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 LRRC37AA6NMS7 1700 aa24.34■■□□□ 1.49
SPSB3-207ENST00000565550 MICALL2Q8IY33 904 aa24.33■■□□□ 1.49
SPSB3-207ENST00000565550 CAPNS2Q96L46 248 aa24.33■■□□□ 1.49
SPSB3-207ENST00000565550 EYA3Q99504 573 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms