RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZNF428Q96B54 188 aa25.65■■□□□ 1.7
CLN6-206ENST00000565471 IL16Q14005 1332 aa25.64■■□□□ 1.7
CLN6-206ENST00000565471 ADAMTSL1Q8N6G6 1762 aa25.64■■□□□ 1.7
CLN6-206ENST00000565471 LRRC37AA6NMS7 1700 aa25.64■■□□□ 1.7
CLN6-206ENST00000565471 DPP8Q6V1X1 898 aaPredicted RBP25.64■■□□□ 1.7
CLN6-206ENST00000565471 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
CLN6-206ENST00000565471 MPNDQ8N594 471 aa25.64■■□□□ 1.7
CLN6-206ENST00000565471 TSR2Q969E8 191 aaKnown RBP25.64■■□□□ 1.7
CLN6-206ENST00000565471 DDX58O95786 925 aaKnown RBP25.63■■□□□ 1.69
CLN6-206ENST00000565471 AOC3Q16853 763 aa25.63■■□□□ 1.69
CLN6-206ENST00000565471 ZBTB38Q8NAP3 1195 aaPredicted RBP25.63■■□□□ 1.69
CLN6-206ENST00000565471 TAF1P21675 1872 aa25.62■■□□□ 1.69
CLN6-206ENST00000565471 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
CLN6-206ENST00000565471 MYD88Q99836 296 aa25.62■■□□□ 1.69
CLN6-206ENST00000565471 GJA3Q9Y6H8 435 aa25.62■■□□□ 1.69
CLN6-206ENST00000565471 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
CLN6-206ENST00000565471 EAPPQ56P03 285 aaPredicted RBP25.61■■□□□ 1.69
CLN6-206ENST00000565471 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
CLN6-206ENST00000565471 KIAA2012Q0VF49 1180 aa25.6■■□□□ 1.69
CLN6-206ENST00000565471 METTL22Q9BUU2 404 aaPredicted RBP25.6■■□□□ 1.69
CLN6-206ENST00000565471 PASKQ96RG2 1323 aa25.6■■□□□ 1.69
CLN6-206ENST00000565471 LMOD1P29536 600 aaPredicted RBP25.59■■□□□ 1.69
CLN6-206ENST00000565471 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
CLN6-206ENST00000565471 STK31Q9BXU1 1019 aa25.59■■□□□ 1.69
CLN6-206ENST00000565471 CREBZFQ9NS37 354 aa25.59■■□□□ 1.69
CLN6-206ENST00000565471 ZNRF3Q9ULT6 936 aa25.59■■□□□ 1.69
CLN6-206ENST00000565471 DUOX1Q9NRD9 1551 aa25.59■■□□□ 1.69
CLN6-206ENST00000565471 LTBP1Q14766 1721 aa25.59■■□□□ 1.69
CLN6-206ENST00000565471 PCCAP05165 728 aaPredicted RBP25.58■■□□□ 1.69
CLN6-206ENST00000565471 SCNN1DP51172 638 aa25.58■■□□□ 1.69
CLN6-206ENST00000565471 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
CLN6-206ENST00000565471 CELF1Q92879 486 aaKnown RBP25.58■■□□□ 1.69
CLN6-206ENST00000565471 CWC25Q9NXE8 425 aaPredicted RBP25.58■■□□□ 1.69
CLN6-206ENST00000565471 CLEC11AQ9Y240 323 aa25.57■■□□□ 1.68
CLN6-206ENST00000565471 ITGBL1O95965 494 aaPredicted RBP25.56■■□□□ 1.68
CLN6-206ENST00000565471 KSR2Q6VAB6 950 aa25.56■■□□□ 1.68
CLN6-206ENST00000565471 MAP3K2Q9Y2U5 619 aa25.56■■□□□ 1.68
CLN6-206ENST00000565471 CXCL9Q07325 125 aa25.55■■□□□ 1.68
CLN6-206ENST00000565471 WDR63Q8IWG1 891 aa25.55■■□□□ 1.68
CLN6-206ENST00000565471 COL4A1P02462 1669 aa25.55■■□□□ 1.68
CLN6-206ENST00000565471 FANCIQ9NVI1 1328 aa25.54■■□□□ 1.68
CLN6-206ENST00000565471 PI4KAP2A4QPH2 592 aa25.53■■□□□ 1.68
CLN6-206ENST00000565471 PDE8AO60658 829 aa25.53■■□□□ 1.68
CLN6-206ENST00000565471 EPS15P42566 896 aa25.53■■□□□ 1.68
CLN6-206ENST00000565471 RPS8P62241 208 aaKnown RBP25.53■■□□□ 1.68
CLN6-206ENST00000565471 PI4KAP1Q8N8J0 262 aa25.53■■□□□ 1.68
CLN6-206ENST00000565471 NSFL1CQ9UNZ2 370 aaKnown RBP25.53■■□□□ 1.68
CLN6-206ENST00000565471 CDHR2Q9BYE9 1310 aa25.53■■□□□ 1.68
CLN6-206ENST00000565471 USP50Q70EL3 339 aaPredicted RBP25.52■■□□□ 1.68
CLN6-206ENST00000565471 CNTROBQ8N137 903 aa25.52■■□□□ 1.68
CLN6-206ENST00000565471 GPRC5DQ9NZD1 345 aa25.52■■□□□ 1.68
CLN6-206ENST00000565471 NEXNQ0ZGT2 675 aa25.51■■□□□ 1.67
CLN6-206ENST00000565471 CCDC152Q4G0S7 254 aa25.51■■□□□ 1.67
CLN6-206ENST00000565471 MAP1SQ66K74 1059 aaPredicted RBP25.51■■□□□ 1.67
CLN6-206ENST00000565471 CIAPIN1Q6FI81 312 aa25.51■■□□□ 1.67
CLN6-206ENST00000565471 SLC4A2P04920 1241 aa25.5■■□□□ 1.67
CLN6-206ENST00000565471 IGKV5-2P06315 115 aa25.5■■□□□ 1.67
CLN6-206ENST00000565471 GPSM2P81274 684 aa25.5■■□□□ 1.67
CLN6-206ENST00000565471 TNIP1Q15025 636 aa25.5■■□□□ 1.67
CLN6-206ENST00000565471 TMEM88BA6NKF7 163 aa25.49■■□□□ 1.67
CLN6-206ENST00000565471 WASHC4Q2M389 1173 aa25.49■■□□□ 1.67
CLN6-206ENST00000565471 G2E3Q7L622 706 aa25.49■■□□□ 1.67
CLN6-206ENST00000565471 SEC31BQ9NQW1 1179 aa25.49■■□□□ 1.67
CLN6-206ENST00000565471 CACNA1FO60840 1977 aa25.48■■□□□ 1.67
CLN6-206ENST00000565471 YDJCA8MPS7 323 aa25.48■■□□□ 1.67
CLN6-206ENST00000565471 GMPSP49915 693 aaPredicted RBP25.48■■□□□ 1.67
CLN6-206ENST00000565471 JARID2Q92833 1246 aaPredicted RBP25.48■■□□□ 1.67
CLN6-206ENST00000565471 EYA3Q99504 573 aa25.48■■□□□ 1.67
CLN6-206ENST00000565471 ADARB2Q9NS39 739 aaKnown RBP25.48■■□□□ 1.67
CLN6-206ENST00000565471 POLLQ9UGP5 575 aa25.48■■□□□ 1.67
CLN6-206ENST00000565471 SALL2Q9Y467 1007 aaPredicted RBP25.48■■□□□ 1.67
CLN6-206ENST00000565471 CNTNAP1P78357 1384 aa25.47■■□□□ 1.67
CLN6-206ENST00000565471 C6orf229H3BNL8 230 aa25.47■■□□□ 1.67
CLN6-206ENST00000565471 RAD17O75943 681 aa25.47■■□□□ 1.67
CLN6-206ENST00000565471 PODXL2Q9NZ53 605 aa25.47■■□□□ 1.67
CLN6-206ENST00000565471 NEURL1BA8MQ27 555 aa25.46■■□□□ 1.67
CLN6-206ENST00000565471 VAMP4O75379 141 aa25.46■■□□□ 1.67
CLN6-206ENST00000565471 FLIIQ13045 1269 aa25.46■■□□□ 1.67
CLN6-206ENST00000565471 IFFO2Q5TF58 517 aa25.46■■□□□ 1.67
CLN6-206ENST00000565471 MKRN1Q9UHC7 482 aaKnown RBP25.46■■□□□ 1.67
CLN6-206ENST00000565471 CTSWP56202 376 aa25.45■■□□□ 1.66
CLN6-206ENST00000565471 FAM9BQ8IZU0 186 aa25.45■■□□□ 1.66
CLN6-206ENST00000565471 TBC1D16Q8TBP0 767 aa25.45■■□□□ 1.66
CLN6-206ENST00000565471 BCL2L13Q9BXK5 485 aa25.45■■□□□ 1.66
CLN6-206ENST00000565471 EXOSC9Q06265 439 aaKnown RBP25.44■■□□□ 1.66
CLN6-206ENST00000565471 CWF19L2Q2TBE0 894 aaKnown RBP25.44■■□□□ 1.66
CLN6-206ENST00000565471 MYH3P11055 1940 aa25.43■■□□□ 1.66
CLN6-206ENST00000565471 RIMBP2O15034 1052 aa25.43■■□□□ 1.66
CLN6-206ENST00000565471 ANKRD18AQ8IVF6 992 aa25.43■■□□□ 1.66
CLN6-206ENST00000565471 CCDC85AQ96PX6 553 aaPredicted RBP25.43■■□□□ 1.66
CLN6-206ENST00000565471 DBNDD1Q9H9R9 158 aa25.43■■□□□ 1.66
CLN6-206ENST00000565471 RTL9Q8NET4 1388 aa25.43■■□□□ 1.66
CLN6-206ENST00000565471 H7C1W4 665 aa25.42■■□□□ 1.66
CLN6-206ENST00000565471 FKBP5Q13451 457 aaPredicted RBP25.42■■□□□ 1.66
CLN6-206ENST00000565471 TTLL11Q8NHH1 800 aa25.42■■□□□ 1.66
CLN6-206ENST00000565471 CDC5LQ99459 802 aaKnown RBP25.42■■□□□ 1.66
CLN6-206ENST00000565471 MYH16Q9H6N6 1097 aa25.42■■□□□ 1.66
CLN6-206ENST00000565471 ECE2O60344 883 aa25.41■■□□□ 1.66
CLN6-206ENST00000565471 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
CLN6-206ENST00000565471 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms