RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ERMNQ8TAM6 284 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 N4BP3O15049 544 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 AKR1B10O60218 316 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 CATIPQ7Z7H3 387 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 SLF2Q8IX21 1173 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 WDHD1O75717 1129 aaPredicted RBP5.78□□□□□ -1.48
SMG1-211ENST00000565324 VPS52Q8N1B4 723 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 SIL1Q9H173 461 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 AFAP1L1Q8TED9 768 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 ARL1P40616 181 aaPredicted RBP5.78□□□□□ -1.48
SMG1-211ENST00000565324 CCDC62Q6P9F0 684 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 BICDL1Q6ZP65 573 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 CCDC63Q8NA47 563 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 TNPO1Q92973 898 aaKnown RBP5.78□□□□□ -1.48
SMG1-211ENST00000565324 ALDH1L2Q3SY69 923 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 ATL3Q6DD88 541 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 PLCB1Q9NQ66 1216 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 TRAF1Q13077 416 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 CCDC144CPQ8IYA2 1237 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 ZNF652Q9Y2D9 606 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 GAS8O95995 478 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 INPP5BP32019 993 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 PPM1FP49593 454 aaPredicted RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 TBC1D31Q96DN5 1066 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 TSPYL2Q9H2G4 693 aaPredicted RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 SPG7Q9UQ90 795 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 ZKSCAN5Q9Y2L8 839 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMG1-211ENST00000565324 PPFIA3O75145 1194 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 WDR78Q5VTH9 848 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 MIER3Q7Z3K6 550 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 GBP5Q96PP8 586 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 MYO1BO43795 1136 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 NBPF7P0C2Y1 421 aaPredicted RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 SATB1Q01826 763 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 CCDC26Q8TAB7 109 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 SMARCA4P51532 1647 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 ZSCAN23Q3MJ62 389 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 RNF10Q8N5U6 811 aaKnown RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 ZMAT2Q96NC0 199 aaKnown RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 TERF1P54274 439 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 GSTA5Q7RTV2 222 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 PRPF31Q8WWY3 499 aaKnown RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 IMPG2Q9BZV3 1241 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 BICDL2A1A5D9 508 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 TMTC2Q8N394 836 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 RGS22Q8NE09 1264 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 MCUR1Q96AQ8 359 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 ERBINQ96RT1 1412 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 SYNCQ9H7C4 482 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 ARHGAP5Q13017 1502 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 RBM5P52756 815 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMG1-211ENST00000565324 PRR16Q569H4 304 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 RUFY4Q6ZNE9 571 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 SYT1P21579 422 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 FERMT3Q86UX7 667 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 MPHOSPH6Q99547 160 aaKnown RBP5.77□□□□□ -1.49
SMG1-211ENST00000565324 USP5P45974 858 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 CABP4P57796 275 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 Q9H521 79 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 C1orf115Q9H7X2 142 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 HAUS2Q9NVX0 235 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 EFCAB5A4FU69 1503 aa5.77□□□□□ -1.49
SMG1-211ENST00000565324 IDH1O75874 414 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 TATP17735 454 aaPredicted RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 MAP2K2P36507 400 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 CNGA4Q8IV77 575 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 BICD1Q96G01 975 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 SYKP43405 635 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 MAP3K12Q12852 859 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 HSP90AA5PQ58FG0 334 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 CPLX3Q8WVH0 158 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 PPP2R1AP30153 589 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 GKAP1Q5VSY0 366 aaPredicted RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 SELENOSQ9BQE4 189 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA8BA8MQT2 603 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 PSMA7O14818 248 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 INF2Q27J81 1249 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 PPP1R12CQ9BZL4 782 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 CETN3O15182 167 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 FCHSD2O94868 740 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 IGHMBP2P38935 993 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 AP1ARQ63HQ0 302 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 ATP6V1AP38606 617 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 STAT6P42226 847 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 RBBP5Q15291 538 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 CAVIN4Q5BKX8 364 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 BMP2KLQ5H9B9 411 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 LRCH2Q5VUJ6 765 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 PPP1R2P41236 205 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 MTMR3Q13615 1198 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 NUTM2DQ5VT03 806 aaPredicted RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 UTP14AQ9BVJ6 771 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 VIMP08670 466 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 ANO6Q4KMQ2 910 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 SDCCAG8Q86SQ7 713 aaPredicted RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 MKNK2Q9HBH9 465 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms