RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 EPHX2P34913 555 aa12.94□□□□□ -0.34
CMTM3-209ENST00000565003 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
CMTM3-209ENST00000565003 SF3B3Q15393 1217 aaKnown RBP12.94□□□□□ -0.34
CMTM3-209ENST00000565003 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
CMTM3-209ENST00000565003 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-209ENST00000565003 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
CMTM3-209ENST00000565003 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 DPP8Q6V1X1 898 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
CMTM3-209ENST00000565003 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
CMTM3-209ENST00000565003 MPNDQ8N594 471 aa12.93□□□□□ -0.34
CMTM3-209ENST00000565003 ZBTB38Q8NAP3 1195 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-209ENST00000565003 GJA3Q9Y6H8 435 aa12.93□□□□□ -0.34
CMTM3-209ENST00000565003 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
CMTM3-209ENST00000565003 DDX58O95786 925 aaKnown RBP12.92□□□□□ -0.34
CMTM3-209ENST00000565003 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
CMTM3-209ENST00000565003 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
CMTM3-209ENST00000565003 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
CMTM3-209ENST00000565003 VPS33BQ9H267 617 aa12.92□□□□□ -0.34
CMTM3-209ENST00000565003 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
CMTM3-209ENST00000565003 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 PI4KAP2A4QPH2 592 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 PCCAP05165 728 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-209ENST00000565003 SCNN1DP51172 638 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 KIAA2012Q0VF49 1180 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 G2E3Q7L622 706 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 PI4KAP1Q8N8J0 262 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
CMTM3-209ENST00000565003 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-209ENST00000565003 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
CMTM3-209ENST00000565003 PNMA8AQ86V59 439 aaPredicted RBP12.9□□□□□ -0.34
CMTM3-209ENST00000565003 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
CMTM3-209ENST00000565003 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.34
CMTM3-209ENST00000565003 SEC31BQ9NQW1 1179 aa12.9□□□□□ -0.34
CMTM3-209ENST00000565003 ZNRF3Q9ULT6 936 aa12.9□□□□□ -0.34
CMTM3-209ENST00000565003 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
CMTM3-209ENST00000565003 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
CMTM3-209ENST00000565003 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
CMTM3-209ENST00000565003 EPS15P42566 896 aa12.89□□□□□ -0.35
CMTM3-209ENST00000565003 GPSM2P81274 684 aa12.89□□□□□ -0.35
CMTM3-209ENST00000565003 CXCL9Q07325 125 aa12.89□□□□□ -0.35
CMTM3-209ENST00000565003 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
CMTM3-209ENST00000565003 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
CMTM3-209ENST00000565003 PDE8AO60658 829 aa12.88□□□□□ -0.35
CMTM3-209ENST00000565003 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
CMTM3-209ENST00000565003 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
CMTM3-209ENST00000565003 MAP1SQ66K74 1059 aaPredicted RBP12.88□□□□□ -0.35
CMTM3-209ENST00000565003 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
CMTM3-209ENST00000565003 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
CMTM3-209ENST00000565003 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
CMTM3-209ENST00000565003 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
CMTM3-209ENST00000565003 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
CMTM3-209ENST00000565003 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 VAMP4O75379 141 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
CMTM3-209ENST00000565003 EXOSC9Q06265 439 aaKnown RBP12.87□□□□□ -0.35
CMTM3-209ENST00000565003 FLIIQ13045 1269 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 CNTROBQ8N137 903 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-209ENST00000565003 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 POLLQ9UGP5 575 aa12.87□□□□□ -0.35
CMTM3-209ENST00000565003 RAD17O75943 681 aa12.86□□□□□ -0.35
CMTM3-209ENST00000565003 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-209ENST00000565003 CTSWP56202 376 aa12.86□□□□□ -0.35
CMTM3-209ENST00000565003 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
CMTM3-209ENST00000565003 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
CMTM3-209ENST00000565003 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
CMTM3-209ENST00000565003 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
CMTM3-209ENST00000565003 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
CMTM3-209ENST00000565003 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
CMTM3-209ENST00000565003 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
CMTM3-209ENST00000565003 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
CMTM3-209ENST00000565003 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 USP50Q70EL3 339 aaPredicted RBP12.84□□□□□ -0.35
CMTM3-209ENST00000565003 UBE3BQ7Z3V4 1068 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 DNAAF4Q8WXU2 420 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
CMTM3-209ENST00000565003 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 MYH3P11055 1940 aa12.84□□□□□ -0.35
CMTM3-209ENST00000565003 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
CMTM3-209ENST00000565003 CNTNAP1P78357 1384 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 H7C1W4 665 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 ECE2O60344 883 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 UFL1O94874 794 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
CMTM3-209ENST00000565003 GCKRQ14397 625 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 TNIP1Q15025 636 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms