RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PLEKHG1Q9ULL1 1385 aa4□□□□□ -1.77
CHD9-213ENST00000564845 ITSN1Q15811 1721 aa4□□□□□ -1.77
CHD9-213ENST00000564845 RASGRP2Q7LDG7 609 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 DNAJC10Q8IXB1 793 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 C17orf53Q8N3J3 647 aaPredicted RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 KAZALD1Q96I82 304 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 CCDC171Q6TFL3 1326 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 CCT2P78371 535 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 LMBR1LQ6UX01 489 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 TBC1D32Q96NH3 1257 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 NCOA5Q9HCD5 579 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 CHD2O14647 1828 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 SLIT3O75094 1523 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 COBLO75128 1261 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 KCNJ4P48050 445 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 SCARF1Q14162 830 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 OTUD7BQ6GQQ9 843 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 CCDC83Q8IWF9 413 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 TNPO1Q92973 898 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 ABCC4O15439 1325 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 NPHP1O15259 732 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 ADORA1P30542 326 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 ARHGEF25Q86VW2 580 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 REV3LO60673 3130 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 RTL1A6NKG5 1358 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 SASH1O94885 1247 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 PDE1AP54750 535 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 FREM2Q5SZK8 3169 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 NBPF26B4DH59 902 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 GSE1Q14687 1217 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 NBPF14Q5TI25 921 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 NBPF10Q6P3W6 841 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 NBPF15Q8N660 670 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 DBNDD2Q9BQY9 259 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 TFIP11Q9UBB9 837 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 GOLIM4O00461 696 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 CAVIN2O95810 425 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 CCDC30Q5VVM6 783 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 VSIG10Q8N0Z9 540 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 SECISBP2LQ93073 1101 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 LETM1O95202 739 aaPredicted RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 TPM1P09493 284 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 ZRSR2Q15696 482 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 PPP1R1BQ9UD71 204 aaPredicted RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 ALS2Q96Q42 1657 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 FLT4P35916 1363 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 ADGRL3Q9HAR2 1447 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 IGSF3O75054 1194 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 KRI1Q8N9T8 703 aaKnown RBP3.99□□□□□ -1.77
CHD9-213ENST00000564845 MIGA1Q8NAN2 632 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 LRRCC1Q9C099 1032 aa3.99□□□□□ -1.77
CHD9-213ENST00000564845 WDHD1O75717 1129 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 EAF2Q96CJ1 260 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 FMN2Q9NZ56 1722 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 ERBB3P21860 1342 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 GNAI2P04899 355 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 IP6K1Q92551 441 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 GBP4Q96PP9 640 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 SLC4A9Q96Q91 983 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 SRP68Q9UHB9 627 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 IGSF1Q8N6C5 1336 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 GIGYF1O75420 1035 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 IPO7O95373 1038 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 PHKG2P15735 406 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 CASTP20810 708 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 PDIA6Q15084 440 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 TTC22Q5TAA0 569 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 XIRP1Q702N8 1843 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 A0A0D9SFI3 127 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 PDGFDQ9GZP0 370 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 TCEAL9Q9UHQ7 104 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 MEGF6O75095 1541 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 POLR3GO15318 223 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 REC8O95072 547 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 XBP1P17861 261 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 HSCBQ8IWL3 235 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 DNAAF4Q8WXU2 420 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 SRCIN1Q9C0H9 1055 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 RAD21O60216 631 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 VIMP08670 466 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 TSR1Q2NL82 804 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 LOC400499M0QZD8 3231 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 MX1P20591 662 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 TSC1Q92574 1164 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 CCDC47Q96A33 483 aaKnown RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 IBTKQ9P2D0 1353 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 PDCP20941 246 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 CNGA1P29973 690 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 SETQ01105 290 aaPredicted RBP3.98□□□□□ -1.77
CHD9-213ENST00000564845 SPECC1Q5M775 1068 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 C3orf67Q6ZVT6 689 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 TICAM2Q86XR7 235 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 CEP89Q96ST8 783 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 ACBD3Q9H3P7 528 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 TBX22Q9Y458 520 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 MAP3K5Q99683 1374 aa3.98□□□□□ -1.77
CHD9-213ENST00000564845 RRP12Q5JTH9 1297 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 TRMT1LQ7Z2T5 733 aaKnown RBP3.97□□□□□ -1.77
CHD9-213ENST00000564845 ZBTB1Q9Y2K1 713 aa3.97□□□□□ -1.77
CHD9-213ENST00000564845 KIF20BQ96Q89 1820 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms