RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 USP20Q9Y2K6 914 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 CHMP3Q9Y3E7 222 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.49□□□□□ -1.37
CHD9-211ENST00000564600 GPC6Q9Y625 555 aaPredicted RBP6.49□□□□□ -1.37
CHD9-211ENST00000564600 ZBTB42B2RXF5 422 aa6.48□□□□□ -1.37
CHD9-211ENST00000564600 GRIK5Q16478 980 aa6.48□□□□□ -1.37
CHD9-211ENST00000564600 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
CHD9-211ENST00000564600 ZFATQ9P243 1243 aa6.48□□□□□ -1.37
CHD9-211ENST00000564600 FAM196BA6NMK8 535 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 M0R2N6 131 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 SSTR4P31391 388 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 HIRAP54198 1017 aaPredicted RBP6.47□□□□□ -1.37
CHD9-211ENST00000564600 SRPK2P78362 688 aaKnown RBP6.47□□□□□ -1.37
CHD9-211ENST00000564600 PERM1Q5SV97 790 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 MSL1Q68DK7 614 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
CHD9-211ENST00000564600 POTEAQ6S8J7 498 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 ILDR2Q71H61 639 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 LPIN3Q9BQK8 851 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 KLK14Q9P0G3 267 aa6.47□□□□□ -1.37
CHD9-211ENST00000564600 ATAD2Q6PL18 1390 aa6.46□□□□□ -1.37
CHD9-211ENST00000564600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.46□□□□□ -1.38
CHD9-211ENST00000564600 DEAF1O75398 565 aaPredicted RBP6.46□□□□□ -1.38
CHD9-211ENST00000564600 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
CHD9-211ENST00000564600 SEC13P55735 322 aa6.46□□□□□ -1.38
CHD9-211ENST00000564600 CCINQ13939 588 aa6.46□□□□□ -1.38
CHD9-211ENST00000564600 ANKMY2Q8IV38 441 aa6.46□□□□□ -1.38
CHD9-211ENST00000564600 C2orf49Q9BVC5 232 aaPredicted RBP6.45□□□□□ -1.38
CHD9-211ENST00000564600 C1orf115Q9H7X2 142 aa6.45□□□□□ -1.38
CHD9-211ENST00000564600 ZMIZ1Q9ULJ6 1067 aa6.45□□□□□ -1.38
CHD9-211ENST00000564600 SASH3O75995 380 aa6.44□□□□□ -1.38
CHD9-211ENST00000564600 FBXO11Q86XK2 927 aa6.44□□□□□ -1.38
CHD9-211ENST00000564600 HINFPQ9BQA5 517 aa6.44□□□□□ -1.38
CHD9-211ENST00000564600 DMGDHQ9UI17 866 aaKnown RBP6.44□□□□□ -1.38
CHD9-211ENST00000564600 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 ELMSAN1Q6PJG2 1045 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 WFDC8Q8IUA0 241 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 AGGF1Q8N302 714 aaeCLIP6.43□□□□□ -1.38
CHD9-211ENST00000564600 IFT43Q96FT9 208 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 SMG9Q9H0W8 520 aaKnown RBP6.43□□□□□ -1.38
CHD9-211ENST00000564600 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 RNF112Q9ULX5 631 aa6.43□□□□□ -1.38
CHD9-211ENST00000564600 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
CHD9-211ENST00000564600 J3QW42 95 aa6.42□□□□□ -1.38
CHD9-211ENST00000564600 IDH3AP50213 366 aa6.42□□□□□ -1.38
CHD9-211ENST00000564600 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
CHD9-211ENST00000564600 DHX32Q7L7V1 743 aaKnown RBP6.42□□□□□ -1.38
CHD9-211ENST00000564600 STK32AQ8WU08 396 aa6.42□□□□□ -1.38
CHD9-211ENST00000564600 PCMTD2Q9NV79 361 aa6.42□□□□□ -1.38
CHD9-211ENST00000564600 NOVA2Q9UNW9 492 aaKnown RBP6.42□□□□□ -1.38
CHD9-211ENST00000564600 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
CHD9-211ENST00000564600 TGFBR3LH3BV60 316 aa6.41□□□□□ -1.38
CHD9-211ENST00000564600 MED26O95402 600 aa6.41□□□□□ -1.38
CHD9-211ENST00000564600 FAM69CQ0P6D2 419 aa6.41□□□□□ -1.38
CHD9-211ENST00000564600 BTBD11A6QL63 1104 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 RARAP10276 462 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 EIF2AK2P19525 551 aaKnown RBP6.4□□□□□ -1.38
CHD9-211ENST00000564600 FSTP19883 344 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 WEE1P30291 646 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 DGKZQ13574 1117 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 GDF6Q6KF10 455 aaPredicted RBP6.4□□□□□ -1.38
CHD9-211ENST00000564600 FAM200AQ8TCP9 573 aa6.4□□□□□ -1.38
CHD9-211ENST00000564600 INPP5BP32019 993 aa6.39□□□□□ -1.39
CHD9-211ENST00000564600 RTN1Q16799 776 aa6.39□□□□□ -1.39
CHD9-211ENST00000564600 STAG2Q8N3U4 1231 aa6.39□□□□□ -1.39
CHD9-211ENST00000564600 NSUN5Q96P11 429 aaKnown RBP6.39□□□□□ -1.39
CHD9-211ENST00000564600 DLL1O00548 723 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 IGFBP4P22692 258 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 IGF2-ASQ6U949 168 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 PRIMPOLQ96LW4 560 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 AKTIPQ9H8T0 292 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 SLAIN2Q9P270 581 aa6.38□□□□□ -1.39
CHD9-211ENST00000564600 TGFB1P01137 390 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
CHD9-211ENST00000564600 OCLNQ16625 522 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 TMEM164Q5U3C3 297 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 IER5Q5VY09 327 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 CAPN12Q6ZSI9 719 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 C14orf37Q86TY3 774 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 TRPM4Q8TD43 1214 aa6.37□□□□□ -1.39
CHD9-211ENST00000564600 QTRT2Q9H974 415 aaKnown RBP6.37□□□□□ -1.39
CHD9-211ENST00000564600 PRMT3O60678 531 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 ADAMTS4O75173 837 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 ATG7O95352 703 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 CDC25BP30305 580 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 GPLD1P80108 840 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 ELOAQ14241 798 aaKnown RBP6.36□□□□□ -1.39
CHD9-211ENST00000564600 TXNDC11Q6PKC3 985 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 PLD4Q96BZ4 506 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 CCDC97Q96F63 343 aaPredicted RBP6.36□□□□□ -1.39
CHD9-211ENST00000564600 FRRS1LQ9P0K9 344 aa6.36□□□□□ -1.39
CHD9-211ENST00000564600 ACIN1Q9UKV3 1341 aaKnown RBP6.35□□□□□ -1.39
CHD9-211ENST00000564600 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
CHD9-211ENST00000564600 MICAL2O94851 1124 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 GLB1P16278 677 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 DZIP1LQ8IYY4 767 aaKnown RBP6.35□□□□□ -1.39
CHD9-211ENST00000564600 RGL4Q8IZJ4 473 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 DTWD1Q8N5C7 304 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 IL22RA1Q8N6P7 574 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms