RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
CNOT1-206ENST00000564557 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
CNOT1-206ENST00000564557 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
CNOT1-206ENST00000564557 ABCC4O15439 1325 aa17.41■□□□□ 0.38
CNOT1-206ENST00000564557 FER1L6Q2WGJ9 1857 aa17.4■□□□□ 0.38
CNOT1-206ENST00000564557 GRAPQ13588 217 aa17.4■□□□□ 0.38
CNOT1-206ENST00000564557 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
CNOT1-206ENST00000564557 C16orf71Q8IYS4 520 aaPredicted RBP17.4■□□□□ 0.38
CNOT1-206ENST00000564557 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
CNOT1-206ENST00000564557 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
CNOT1-206ENST00000564557 PDE8AO60658 829 aa17.39■□□□□ 0.37
CNOT1-206ENST00000564557 PRELPP51888 382 aa17.39■□□□□ 0.37
CNOT1-206ENST00000564557 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
CNOT1-206ENST00000564557 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
CNOT1-206ENST00000564557 JARID2Q92833 1246 aaPredicted RBP17.39■□□□□ 0.37
CNOT1-206ENST00000564557 ATP6V0A2Q9Y487 856 aa17.39■□□□□ 0.37
CNOT1-206ENST00000564557 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 C1QTNF8P60827 252 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 SP8Q8IXZ3 490 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 PSMD1Q99460 953 aa17.38■□□□□ 0.37
CNOT1-206ENST00000564557 GLTPD2A6NH11 291 aa17.37■□□□□ 0.37
CNOT1-206ENST00000564557 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CNOT1-206ENST00000564557 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
CNOT1-206ENST00000564557 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
CNOT1-206ENST00000564557 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
CNOT1-206ENST00000564557 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
CNOT1-206ENST00000564557 MPNDQ8N594 471 aa17.36■□□□□ 0.37
CNOT1-206ENST00000564557 NMRK2Q9NPI5 230 aa17.36■□□□□ 0.37
CNOT1-206ENST00000564557 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
CNOT1-206ENST00000564557 F6X3S4 739 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNOT1-206ENST00000564557 GCKRQ14397 625 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
CNOT1-206ENST00000564557 LAMB2P55268 1798 aa17.35■□□□□ 0.37
CNOT1-206ENST00000564557 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
CNOT1-206ENST00000564557 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
CNOT1-206ENST00000564557 CELF1Q92879 486 aaKnown RBP17.34■□□□□ 0.37
CNOT1-206ENST00000564557 DICER1Q9UPY3 1922 aaKnown RBP17.33■□□□□ 0.37
CNOT1-206ENST00000564557 H7C1W4 665 aa17.33■□□□□ 0.36
CNOT1-206ENST00000564557 KIF3CO14782 793 aa17.33■□□□□ 0.36
CNOT1-206ENST00000564557 PPIP5K2O43314 1243 aa17.33■□□□□ 0.36
CNOT1-206ENST00000564557 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
CNOT1-206ENST00000564557 VEGFAP15692 232 aaPredicted RBP17.33■□□□□ 0.36
CNOT1-206ENST00000564557 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
CNOT1-206ENST00000564557 TIAM2Q8IVF5 1701 aa17.33■□□□□ 0.36
CNOT1-206ENST00000564557 TOMM70O94826 608 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 CTSWP56202 376 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 NIM1KQ8IY84 436 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
CNOT1-206ENST00000564557 SSH1Q8WYL5 1049 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
CNOT1-206ENST00000564557 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
CNOT1-206ENST00000564557 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
CNOT1-206ENST00000564557 NSFL1CQ9UNZ2 370 aaKnown RBP17.32■□□□□ 0.36
CNOT1-206ENST00000564557 PTPRCP08575 1304 aa17.31■□□□□ 0.36
CNOT1-206ENST00000564557 BEND3Q5T5X7 828 aa17.31■□□□□ 0.36
CNOT1-206ENST00000564557 TRMT2AQ8IZ69 625 aaKnown RBP17.31■□□□□ 0.36
CNOT1-206ENST00000564557 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
CNOT1-206ENST00000564557 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
CNOT1-206ENST00000564557 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
CNOT1-206ENST00000564557 DDNO94850 711 aaPredicted RBP17.3■□□□□ 0.36
CNOT1-206ENST00000564557 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 AOC3Q16853 763 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
CNOT1-206ENST00000564557 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 TAF1P21675 1872 aa17.29■□□□□ 0.36
CNOT1-206ENST00000564557 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 FZD9O00144 591 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
CNOT1-206ENST00000564557 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 EYA3Q99504 573 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 PLA2G12BQ9BX93 195 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 GJA3Q9Y6H8 435 aa17.28■□□□□ 0.36
CNOT1-206ENST00000564557 G3V3G9 751 aa17.27■□□□□ 0.36
CNOT1-206ENST00000564557 GRM8O00222 908 aa17.27■□□□□ 0.36
CNOT1-206ENST00000564557 WASHC4Q2M389 1173 aa17.27■□□□□ 0.36
CNOT1-206ENST00000564557 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
CNOT1-206ENST00000564557 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
CNOT1-206ENST00000564557 GREM2Q9H772 168 aa17.27■□□□□ 0.36
CNOT1-206ENST00000564557 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
CNOT1-206ENST00000564557 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
CNOT1-206ENST00000564557 GPSM2P81274 684 aa17.26■□□□□ 0.35
CNOT1-206ENST00000564557 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
CNOT1-206ENST00000564557 GPC2Q8N158 579 aa17.26■□□□□ 0.35
CNOT1-206ENST00000564557 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
CNOT1-206ENST00000564557 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
CNOT1-206ENST00000564557 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms