RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 LMNB1P20700 586 aa10.6□□□□□ -0.71
NSMCE1-207ENST00000564342 HOXA10P31260 410 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-207ENST00000564342 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
NSMCE1-207ENST00000564342 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 EXOSC9Q06265 439 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 TRIM28Q13263 835 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 SOGA3Q5TF21 947 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 ZNF428Q96B54 188 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 NLRP3Q96P20 1036 aa10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 TRMT112Q9UI30 125 aaKnown RBP10.59□□□□□ -0.71
NSMCE1-207ENST00000564342 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
NSMCE1-207ENST00000564342 VAMP4O75379 141 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 G2E3Q7L622 706 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 STK31Q9BXU1 1019 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 TAOK3Q9H2K8 898 aa10.58□□□□□ -0.72
NSMCE1-207ENST00000564342 KIF3CO14782 793 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 DDX58O95786 925 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 C1QTNF8P60827 252 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 FAM89AQ96GI7 184 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 MYD88Q99836 296 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 METTL22Q9BUU2 404 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 ABCC4O15439 1325 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 COL4A1P02462 1669 aa10.57□□□□□ -0.72
NSMCE1-207ENST00000564342 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 NMRK2Q9NPI5 230 aa10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 MAP3K2Q9Y2U5 619 aa10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 MYH3P11055 1940 aa10.56□□□□□ -0.72
NSMCE1-207ENST00000564342 WDR90Q96KV7 1748 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 PI4KAP2A4QPH2 592 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 ZBTB22O15209 634 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 IGKV5-2P06315 115 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 RTL5Q5HYW3 569 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 CC2D2BQ6DHV5 1058 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 RTKN2Q8IZC4 609 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 PI4KAP1Q8N8J0 262 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
NSMCE1-207ENST00000564342 COL4A5P29400 1685 aa10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 PCCAP05165 728 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 FLIIQ13045 1269 aa10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 DIEXFQ68CQ4 756 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 ZBTB38Q8NAP3 1195 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 CWC25Q9NXE8 425 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-207ENST00000564342 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 DUOX1Q9NRD9 1551 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 IARSP41252 1262 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 FKBP5Q13451 457 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 GRAPQ13588 217 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 DDX46Q7L014 1031 aaKnown RBP10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 GRAPLQ8TC17 118 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 PSMD1Q99460 953 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 ZNF277Q9NRM2 450 aaPredicted RBP10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
NSMCE1-207ENST00000564342 NEURL1BA8MQ27 555 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 E9PSI1 815 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 BBOX1O75936 387 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 SLFN5Q08AF3 891 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 CWF19L2Q2TBE0 894 aaKnown RBP10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 SP8Q8IXZ3 490 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 MIER1Q8N108 512 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 JARID2Q92833 1246 aaPredicted RBP10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 RRAGCQ9HB90 399 aa10.52□□□□□ -0.73
NSMCE1-207ENST00000564342 SCN4AP35499 1836 aa10.51□□□□□ -0.73
NSMCE1-207ENST00000564342 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
NSMCE1-207ENST00000564342 DNAAF4Q8WXU2 420 aa10.51□□□□□ -0.73
NSMCE1-207ENST00000564342 CELF1Q92879 486 aaKnown RBP10.51□□□□□ -0.73
NSMCE1-207ENST00000564342 CDCA7LQ96GN5 454 aa10.51□□□□□ -0.73
NSMCE1-207ENST00000564342 POTECB2RU33 542 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 PDE8AO60658 829 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 TOMM70O94826 608 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 DDNO94850 711 aaPredicted RBP10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 HSP90B1P14625 803 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 TRMT2AQ8IZ69 625 aaKnown RBP10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 LINS1Q8NG48 757 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 ZNF541Q9H0D2 1346 aa10.5□□□□□ -0.73
NSMCE1-207ENST00000564342 F6X3S4 739 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms