RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 GRM8O00222 908 aa21.25■□□□□ 0.99
CMTM3-208ENST00000564247 UBTFL1P0CB47 393 aaPredicted RBP21.25■□□□□ 0.99
CMTM3-208ENST00000564247 FER1L6Q2WGJ9 1857 aa21.25■□□□□ 0.99
CMTM3-208ENST00000564247 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
CMTM3-208ENST00000564247 USP44Q9H0E7 712 aa21.25■□□□□ 0.99
CMTM3-208ENST00000564247 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
CMTM3-208ENST00000564247 C21orf2O43822 256 aa21.24■□□□□ 0.99
CMTM3-208ENST00000564247 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
CMTM3-208ENST00000564247 NLRP10Q86W26 655 aa21.24■□□□□ 0.99
CMTM3-208ENST00000564247 MEIS3Q99687 375 aa21.24■□□□□ 0.99
CMTM3-208ENST00000564247 GPBP1L1Q9HC44 474 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-208ENST00000564247 CCDC88AQ3V6T2 1871 aa21.24■□□□□ 0.99
CMTM3-208ENST00000564247 GNAI2P04899 355 aa21.23■□□□□ 0.99
CMTM3-208ENST00000564247 RASSF7Q02833 373 aa21.23■□□□□ 0.99
CMTM3-208ENST00000564247 UTP14AQ9BVJ6 771 aaKnown RBP21.23■□□□□ 0.99
CMTM3-208ENST00000564247 RNF181Q9P0P0 153 aa21.23■□□□□ 0.99
CMTM3-208ENST00000564247 NFKBIEO00221 500 aa21.22■□□□□ 0.99
CMTM3-208ENST00000564247 LMNB1P20700 586 aa21.22■□□□□ 0.99
CMTM3-208ENST00000564247 SOGA3Q5TF21 947 aa21.22■□□□□ 0.99
CMTM3-208ENST00000564247 H7C1W4 665 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 SLC10A5Q5PT55 438 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 ZNF526Q8TF50 670 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-208ENST00000564247 C7orf43Q8WVR3 580 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-208ENST00000564247 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
CMTM3-208ENST00000564247 UTYO14607 1347 aa21.21■□□□□ 0.99
CMTM3-208ENST00000564247 PCCAP05165 728 aaPredicted RBP21.2■□□□□ 0.98
CMTM3-208ENST00000564247 NBPF7P0C2Y1 421 aaPredicted RBP21.2■□□□□ 0.98
CMTM3-208ENST00000564247 HOXA10P31260 410 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-208ENST00000564247 PRELPP51888 382 aa21.19■□□□□ 0.98
CMTM3-208ENST00000564247 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
CMTM3-208ENST00000564247 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-208ENST00000564247 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
CMTM3-208ENST00000564247 LTBP3Q9NS15 1303 aa21.19■□□□□ 0.98
CMTM3-208ENST00000564247 ZC3H4Q9UPT8 1303 aaKnown RBP21.19■□□□□ 0.98
CMTM3-208ENST00000564247 DICER1Q9UPY3 1922 aaKnown RBP21.19■□□□□ 0.98
CMTM3-208ENST00000564247 HSP90B1P14625 803 aaKnown RBP21.18■□□□□ 0.98
CMTM3-208ENST00000564247 NLRP3Q96P20 1036 aa21.18■□□□□ 0.98
CMTM3-208ENST00000564247 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-208ENST00000564247 JARID2Q92833 1246 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-208ENST00000564247 TAOK3Q9H2K8 898 aa21.17■□□□□ 0.98
CMTM3-208ENST00000564247 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
CMTM3-208ENST00000564247 LRRFIP2Q9Y608 721 aaKnown RBP21.17■□□□□ 0.98
CMTM3-208ENST00000564247 SH3TC1Q8TE82 1336 aa21.17■□□□□ 0.98
CMTM3-208ENST00000564247 LAMB2P55268 1798 aa21.17■□□□□ 0.98
CMTM3-208ENST00000564247 TIAM2Q8IVF5 1701 aa21.16■□□□□ 0.98
CMTM3-208ENST00000564247 C1QTNF8P60827 252 aa21.16■□□□□ 0.98
CMTM3-208ENST00000564247 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
CMTM3-208ENST00000564247 C3orf67Q6ZVT6 689 aa21.16■□□□□ 0.98
CMTM3-208ENST00000564247 RPAP2Q8IXW5 612 aaPredicted RBP21.16■□□□□ 0.98
CMTM3-208ENST00000564247 FAM89AQ96GI7 184 aa21.16■□□□□ 0.98
CMTM3-208ENST00000564247 RBM17Q96I25 401 aaKnown RBP21.15■□□□□ 0.98
CMTM3-208ENST00000564247 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
CMTM3-208ENST00000564247 CRAMP1Q96RY5 1269 aa21.15■□□□□ 0.98
CMTM3-208ENST00000564247 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
CMTM3-208ENST00000564247 SYNE4Q8N205 404 aa21.14■□□□□ 0.97
CMTM3-208ENST00000564247 SUCLG2Q96I99 432 aa21.14■□□□□ 0.97
CMTM3-208ENST00000564247 PCDHB15Q9Y5E8 787 aa21.14■□□□□ 0.97
CMTM3-208ENST00000564247 DDX60Q8IY21 1712 aaKnown RBP21.13■□□□□ 0.97
CMTM3-208ENST00000564247 IRS4O14654 1257 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-208ENST00000564247 CASP7P55210 303 aa21.13■□□□□ 0.97
CMTM3-208ENST00000564247 RTKN2Q8IZC4 609 aa21.13■□□□□ 0.97
CMTM3-208ENST00000564247 RWDD1Q9H446 243 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-208ENST00000564247 KDM2BQ8NHM5 1336 aa21.12■□□□□ 0.97
CMTM3-208ENST00000564247 KIF3CO14782 793 aa21.12■□□□□ 0.97
CMTM3-208ENST00000564247 HMMRO75330 724 aa21.12■□□□□ 0.97
CMTM3-208ENST00000564247 HCLS1P14317 486 aaPredicted RBP21.12■□□□□ 0.97
CMTM3-208ENST00000564247 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
CMTM3-208ENST00000564247 CC2D2BQ6DHV5 1058 aa21.12■□□□□ 0.97
CMTM3-208ENST00000564247 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
CMTM3-208ENST00000564247 CEP85Q6P2H3 762 aa21.11■□□□□ 0.97
CMTM3-208ENST00000564247 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
CMTM3-208ENST00000564247 ANKRD44Q8N8A2 993 aa21.11■□□□□ 0.97
CMTM3-208ENST00000564247 PLA2G12BQ9BX93 195 aa21.11■□□□□ 0.97
CMTM3-208ENST00000564247 BICC1Q9H694 974 aaKnown RBP21.11■□□□□ 0.97
CMTM3-208ENST00000564247 SNED1Q8TER0 1413 aa21.11■□□□□ 0.97
CMTM3-208ENST00000564247 PDE8AO60658 829 aa21.1■□□□□ 0.97
CMTM3-208ENST00000564247 NMRK2Q9NPI5 230 aa21.1■□□□□ 0.97
CMTM3-208ENST00000564247 PPEF1O14829 653 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-208ENST00000564247 GRIPAP1Q4V328 841 aa21.09■□□□□ 0.97
CMTM3-208ENST00000564247 KAZALD1Q96I82 304 aa21.09■□□□□ 0.97
CMTM3-208ENST00000564247 GLTPD2A6NH11 291 aa21.08■□□□□ 0.97
CMTM3-208ENST00000564247 FOXO4P98177 505 aa21.08■□□□□ 0.97
CMTM3-208ENST00000564247 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
CMTM3-208ENST00000564247 SRGAP3O43295 1099 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 MTX1Q13505 466 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 RABL6Q3YEC7 729 aaPredicted RBP21.07■□□□□ 0.96
CMTM3-208ENST00000564247 EPHA10Q5JZY3 1008 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 LMBR1LQ6UX01 489 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 PSMD1Q99460 953 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 CHMP3Q9Y3E7 222 aa21.07■□□□□ 0.96
CMTM3-208ENST00000564247 BBOX1O75936 387 aa21.06■□□□□ 0.96
CMTM3-208ENST00000564247 SF3B3Q15393 1217 aaKnown RBP21.06■□□□□ 0.96
CMTM3-208ENST00000564247 DDX46Q7L014 1031 aaKnown RBP21.06■□□□□ 0.96
CMTM3-208ENST00000564247 ATP6V0A2Q9Y487 856 aa21.06■□□□□ 0.96
CMTM3-208ENST00000564247 TAF1P21675 1872 aa21.05■□□□□ 0.96
CMTM3-208ENST00000564247 CSF1RP07333 972 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms