RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 LRRC37AA6NMS7 1700 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 SBF1O95248 1867 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 C21orf2O43822 256 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 BCAR3O75815 825 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 HSP90B1P14625 803 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 PRELPP51888 382 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 GRAPQ13588 217 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 GRAPLQ8TC17 118 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 API5Q9BZZ5 524 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 TAF1P21675 1872 aa11.19□□□□□ -0.62
NSMCE1-206ENST00000563900 GRM8O00222 908 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 CTSWP56202 376 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 SLC4A10Q6U841 1118 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
NSMCE1-206ENST00000563900 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 BBOX1O75936 387 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 CSF1RP07333 972 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 RASSF7Q02833 373 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 DDX46Q7L014 1031 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 CELF1Q92879 486 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 KAZALD1Q96I82 304 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 ATP6V0A2Q9Y487 856 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
NSMCE1-206ENST00000563900 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 TRIM27P14373 513 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 FOXO4P98177 505 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 USP44Q9H0E7 712 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
NSMCE1-206ENST00000563900 DICER1Q9UPY3 1922 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 NBPF7P0C2Y1 421 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 YY1P25490 414 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 CCT4P50991 539 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 EPHA10Q5JZY3 1008 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 INTS3Q68E01 1043 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 SP8Q8IXZ3 490 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 RTKN2Q8IZC4 609 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 PSMD1Q99460 953 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 GREM2Q9H772 168 aa11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-206ENST00000563900 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 LMNB1P20700 586 aa11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 COL4A5P29400 1685 aa11.14□□□□□ -0.63
NSMCE1-206ENST00000563900 CCDC88AQ3V6T2 1871 aa11.13□□□□□ -0.63
NSMCE1-206ENST00000563900 TIAM2Q8IVF5 1701 aa11.13□□□□□ -0.63
NSMCE1-206ENST00000563900 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
NSMCE1-206ENST00000563900 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
NSMCE1-206ENST00000563900 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-206ENST00000563900 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 ITGA6P23229 1130 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 LMBR1LQ6UX01 489 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 FRAT1Q92837 279 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 PODXL2Q9NZ53 605 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
NSMCE1-206ENST00000563900 RLBP1P12271 317 aa11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 ZNF784Q8NCA9 323 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 MEIS3Q99687 375 aa11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 BICC1Q9H694 974 aaKnown RBP11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
NSMCE1-206ENST00000563900 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 GPSM2P81274 684 aa11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 MPNDQ8N594 471 aa11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 TMEM57Q8N5G2 664 aa11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 VPS33BQ9H267 617 aa11.1□□□□□ -0.63
NSMCE1-206ENST00000563900 SPEF2Q9C093 1822 aa11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 ANKRD18BA2A2Z9 1011 aa11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 UBTFL1P0CB47 393 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 KIAA2012Q0VF49 1180 aa11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 DPP8Q6V1X1 898 aaPredicted RBP11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 DZIP1LQ8IYY4 767 aaKnown RBP11.09□□□□□ -0.63
NSMCE1-206ENST00000563900 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms