RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 C1orf216Q8TAB5 229 aa8.39□□□□□ -1.07
TCF4-220ENST00000563824 TNS1Q9HBL0 1735 aaKnown RBP8.38□□□□□ -1.07
TCF4-220ENST00000563824 SPATA31A3Q5VYP0 1347 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 SKOR1P84550 965 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 MYT1Q01538 1121 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 EZH2Q15910 746 aaKnown RBP8.38□□□□□ -1.07
TCF4-220ENST00000563824 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 FAM196AQ6ZSG2 479 aa8.38□□□□□ -1.07
TCF4-220ENST00000563824 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 CDC42BPGQ6DT37 1551 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
TCF4-220ENST00000563824 FOXO3O43524 673 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 SCNN1AP37088 669 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
TCF4-220ENST00000563824 TSEN2Q8NCE0 465 aaKnown RBP8.37□□□□□ -1.07
TCF4-220ENST00000563824 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 MKNK1Q9BUB5 465 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 NEXMIFQ5QGS0 1516 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
TCF4-220ENST00000563824 H3BRB1 525 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 SCTRP47872 440 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 RPIAP49247 311 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 OCLNQ16625 522 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
TCF4-220ENST00000563824 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
TCF4-220ENST00000563824 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
TCF4-220ENST00000563824 E9PCH4 1651 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 RREB1Q92766 1687 aa8.36□□□□□ -1.07
TCF4-220ENST00000563824 KIF1AQ12756 1690 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 M0R2N6 131 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
TCF4-220ENST00000563824 ZNF211Q13398 564 aaPredicted RBP8.35□□□□□ -1.07
TCF4-220ENST00000563824 PPP1R18Q6NYC8 613 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 ZNF775Q96BV0 537 aaPredicted RBP8.35□□□□□ -1.07
TCF4-220ENST00000563824 PRKD2Q9BZL6 878 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 ZNF358Q9NW07 568 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 ARHGEF10O15013 1369 aa8.35□□□□□ -1.07
TCF4-220ENST00000563824 APBA3O96018 575 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 ERVK-9P63128 1117 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
TCF4-220ENST00000563824 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
TCF4-220ENST00000563824 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
TCF4-220ENST00000563824 BACH1O14867 736 aa8.33□□□□□ -1.08
TCF4-220ENST00000563824 GDF10P55107 478 aa8.33□□□□□ -1.08
TCF4-220ENST00000563824 MARSP56192 900 aaKnown RBP8.33□□□□□ -1.08
TCF4-220ENST00000563824 ANO2Q9NQ90 1003 aa8.33□□□□□ -1.08
TCF4-220ENST00000563824 EGFL7Q9UHF1 273 aa8.33□□□□□ -1.08
TCF4-220ENST00000563824 V9GY48 417 aaPredicted RBP8.33□□□□□ -1.08
TCF4-220ENST00000563824 SBNO1A3KN83 1393 aa8.33□□□□□ -1.08
TCF4-220ENST00000563824 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 TNS3Q68CZ2 1445 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
TCF4-220ENST00000563824 E9PSI1 815 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 ERCC3P19447 782 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 FKBP5Q13451 457 aaPredicted RBP8.32□□□□□ -1.08
TCF4-220ENST00000563824 TAS1R3Q7RTX0 852 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 KRT28Q7Z3Y7 464 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 CDK15Q96Q40 435 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
TCF4-220ENST00000563824 SPATA31A5Q5VU36 1347 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 SPATA31A7Q8IWB4 1347 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 FAM83GA6ND36 823 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
TCF4-220ENST00000563824 TRIM37O94972 964 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 WEE1P30291 646 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 CYP2U1Q7Z449 544 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
TCF4-220ENST00000563824 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
TCF4-220ENST00000563824 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
TCF4-220ENST00000563824 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
TCF4-220ENST00000563824 ADH1CP00326 375 aa8.3□□□□□ -1.08
TCF4-220ENST00000563824 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
TCF4-220ENST00000563824 GTF3C2Q8WUA4 911 aaPredicted RBP8.3□□□□□ -1.08
TCF4-220ENST00000563824 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
TCF4-220ENST00000563824 RGPD3A6NKT7 1758 aaPredicted RBP8.3□□□□□ -1.08
TCF4-220ENST00000563824 RGPD4Q7Z3J3 1758 aa8.3□□□□□ -1.08
TCF4-220ENST00000563824 C21orf2O43822 256 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 STAU1O95793 577 aaKnown RBP8.29□□□□□ -1.08
TCF4-220ENST00000563824 IGFBP4P22692 258 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 SCNN1DP51172 638 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 SCG3Q8WXD2 468 aaKnown RBP8.29□□□□□ -1.08
TCF4-220ENST00000563824 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 BTG4Q9NY30 223 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 SEPT3Q9UH03 358 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 NAIPQ13075 1403 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
TCF4-220ENST00000563824 ICMTO60725 284 aa8.28□□□□□ -1.08
TCF4-220ENST00000563824 INHAP05111 366 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms