RNA–Protein interactions for RNA: ENST00000563550.5

LINC01225-203, Transcript of LINC01225 pseudogene, humanhuman

BASIC

Gene LINC01225, Length 1,244 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-203ENST00000563550 PTPRCP08575 1304 aa21■□□□□ 0.95
LINC01225-203ENST00000563550 PPEF1O14829 653 aaPredicted RBP20.99■□□□□ 0.95
LINC01225-203ENST00000563550 FKBP4Q02790 459 aaKnown RBP eCLIP20.99■□□□□ 0.95
LINC01225-203ENST00000563550 UBE3BQ7Z3V4 1068 aa20.99■□□□□ 0.95
LINC01225-203ENST00000563550 TTLL11Q8NHH1 800 aa20.99■□□□□ 0.95
LINC01225-203ENST00000563550 CELF1Q92879 486 aaKnown RBP20.99■□□□□ 0.95
LINC01225-203ENST00000563550 PSMD1Q99460 953 aa20.99■□□□□ 0.95
LINC01225-203ENST00000563550 ALDH1L1O75891 902 aa20.98■□□□□ 0.95
LINC01225-203ENST00000563550 GRIPAP1Q4V328 841 aa20.98■□□□□ 0.95
LINC01225-203ENST00000563550 SEC31BQ9NQW1 1179 aa20.98■□□□□ 0.95
LINC01225-203ENST00000563550 DDX60Q8IY21 1712 aaKnown RBP20.98■□□□□ 0.95
LINC01225-203ENST00000563550 FER1L6Q2WGJ9 1857 aa20.97■□□□□ 0.95
LINC01225-203ENST00000563550 CSF1RP07333 972 aa20.97■□□□□ 0.95
LINC01225-203ENST00000563550 SMC4Q9NTJ3 1288 aa20.97■□□□□ 0.95
LINC01225-203ENST00000563550 CTSWP56202 376 aa20.96■□□□□ 0.95
LINC01225-203ENST00000563550 RPS8P62241 208 aaKnown RBP20.96■□□□□ 0.95
LINC01225-203ENST00000563550 NOB1Q9ULX3 412 aaKnown RBP20.96■□□□□ 0.95
LINC01225-203ENST00000563550 SBF1O95248 1867 aa20.96■□□□□ 0.95
LINC01225-203ENST00000563550 CCDC152Q4G0S7 254 aa20.95■□□□□ 0.94
LINC01225-203ENST00000563550 SLC4A10Q6U841 1118 aa20.95■□□□□ 0.94
LINC01225-203ENST00000563550 TMC4Q7Z404 712 aa20.95■□□□□ 0.94
LINC01225-203ENST00000563550 RTFDC1Q9BY42 306 aaPredicted RBP20.95■□□□□ 0.94
LINC01225-203ENST00000563550 SRCIN1Q9C0H9 1055 aa20.95■□□□□ 0.94
LINC01225-203ENST00000563550 ZNF277Q9NRM2 450 aaPredicted RBP20.95■□□□□ 0.94
LINC01225-203ENST00000563550 ZC3H4Q9UPT8 1303 aaKnown RBP20.95■□□□□ 0.94
LINC01225-203ENST00000563550 LAMB2P55268 1798 aa20.95■□□□□ 0.94
LINC01225-203ENST00000563550 COL4A1P02462 1669 aa20.94■□□□□ 0.94
LINC01225-203ENST00000563550 FOXO4P98177 505 aa20.94■□□□□ 0.94
LINC01225-203ENST00000563550 UTYO14607 1347 aa20.94■□□□□ 0.94
LINC01225-203ENST00000563550 GRM8O00222 908 aa20.93■□□□□ 0.94
LINC01225-203ENST00000563550 CCDC85AQ96PX6 553 aaPredicted RBP20.93■□□□□ 0.94
LINC01225-203ENST00000563550 RTL9Q8NET4 1388 aa20.93■□□□□ 0.94
LINC01225-203ENST00000563550 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
LINC01225-203ENST00000563550 ARHGAP45Q92619 1136 aa20.92■□□□□ 0.94
LINC01225-203ENST00000563550 KAZALD1Q96I82 304 aa20.92■□□□□ 0.94
LINC01225-203ENST00000563550 GREM2Q9H772 168 aa20.92■□□□□ 0.94
LINC01225-203ENST00000563550 BCAR3O75815 825 aa20.91■□□□□ 0.94
LINC01225-203ENST00000563550 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
LINC01225-203ENST00000563550 ZNF526Q8TF50 670 aaPredicted RBP20.91■□□□□ 0.94
LINC01225-203ENST00000563550 GLTPD2A6NH11 291 aa20.9■□□□□ 0.94
LINC01225-203ENST00000563550 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
LINC01225-203ENST00000563550 MPNDQ8N594 471 aa20.9■□□□□ 0.94
LINC01225-203ENST00000563550 USP44Q9H0E7 712 aa20.9■□□□□ 0.94
LINC01225-203ENST00000563550 CACNA1SQ13698 1873 aa20.9■□□□□ 0.94
LINC01225-203ENST00000563550 VPS33BQ9H267 617 aa20.89■□□□□ 0.93
LINC01225-203ENST00000563550 GPBP1L1Q9HC44 474 aaPredicted RBP20.89■□□□□ 0.93
LINC01225-203ENST00000563550 C9orf78Q9NZ63 289 aaPredicted RBP20.89■□□□□ 0.93
LINC01225-203ENST00000563550 TAF1P21675 1872 aa20.89■□□□□ 0.93
LINC01225-203ENST00000563550 FZD9O00144 591 aa20.88■□□□□ 0.93
LINC01225-203ENST00000563550 KIF3CO14782 793 aa20.88■□□□□ 0.93
LINC01225-203ENST00000563550 C1QTNF8P60827 252 aa20.88■□□□□ 0.93
LINC01225-203ENST00000563550 GPSM2P81274 684 aa20.88■□□□□ 0.93
LINC01225-203ENST00000563550 DPP8Q6V1X1 898 aaPredicted RBP20.88■□□□□ 0.93
LINC01225-203ENST00000563550 API5Q9BZZ5 524 aaKnown RBP20.88■□□□□ 0.93
LINC01225-203ENST00000563550 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
LINC01225-203ENST00000563550 SUCLG2Q96I99 432 aa20.87■□□□□ 0.93
LINC01225-203ENST00000563550 BSDC1Q9NW68 430 aaPredicted RBP20.87■□□□□ 0.93
LINC01225-203ENST00000563550 PODXL2Q9NZ53 605 aa20.87■□□□□ 0.93
LINC01225-203ENST00000563550 POLLQ9UGP5 575 aa20.87■□□□□ 0.93
LINC01225-203ENST00000563550 POTECB2RU33 542 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 ITGA6P23229 1130 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 FAM161AQ3B820 660 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 ANKRD18AQ8IVF6 992 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 CDC5LQ99459 802 aaKnown RBP20.86■□□□□ 0.93
LINC01225-203ENST00000563550 NMRK2Q9NPI5 230 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 COL4A5P29400 1685 aa20.86■□□□□ 0.93
LINC01225-203ENST00000563550 CCT4P50991 539 aaKnown RBP20.85■□□□□ 0.93
LINC01225-203ENST00000563550 LMBR1LQ6UX01 489 aa20.85■□□□□ 0.93
LINC01225-203ENST00000563550 SUPT20HQ8NEM7 779 aa20.85■□□□□ 0.93
LINC01225-203ENST00000563550 MINPP1Q9UNW1 487 aa20.85■□□□□ 0.93
LINC01225-203ENST00000563550 NSFL1CQ9UNZ2 370 aaKnown RBP20.85■□□□□ 0.93
LINC01225-203ENST00000563550 KIF16BQ96L93 1317 aa20.84■□□□□ 0.93
LINC01225-203ENST00000563550 KIAA2012Q0VF49 1180 aa20.84■□□□□ 0.93
LINC01225-203ENST00000563550 RABL6Q3YEC7 729 aaPredicted RBP20.84■□□□□ 0.93
LINC01225-203ENST00000563550 INTS3Q68E01 1043 aaKnown RBP20.84■□□□□ 0.93
LINC01225-203ENST00000563550 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 TRIM27P14373 513 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 AOC3Q16853 763 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 DPY19L2Q6NUT2 758 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 LARGE2Q8N3Y3 721 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 TBC1D16Q8TBP0 767 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 TNNQ9UQP3 1299 aa20.83■□□□□ 0.93
LINC01225-203ENST00000563550 CCDC88AQ3V6T2 1871 aa20.83■□□□□ 0.92
LINC01225-203ENST00000563550 DUOX1Q9NRD9 1551 aa20.82■□□□□ 0.92
LINC01225-203ENST00000563550 WTIPA6NIX2 430 aaPredicted RBP20.82■□□□□ 0.92
LINC01225-203ENST00000563550 IPO8O15397 1037 aaKnown RBP20.82■□□□□ 0.92
LINC01225-203ENST00000563550 PPIP5K2O43314 1243 aa20.82■□□□□ 0.92
LINC01225-203ENST00000563550 DDNO94850 711 aaPredicted RBP20.82■□□□□ 0.92
LINC01225-203ENST00000563550 ATF7IPQ6VMQ6 1270 aa20.82■□□□□ 0.92
LINC01225-203ENST00000563550 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
LINC01225-203ENST00000563550 RRAGCQ9HB90 399 aa20.82■□□□□ 0.92
LINC01225-203ENST00000563550 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
LINC01225-203ENST00000563550 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
LINC01225-203ENST00000563550 ZNF541Q9H0D2 1346 aa20.81■□□□□ 0.92
LINC01225-203ENST00000563550 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
LINC01225-203ENST00000563550 IFIT5Q13325 482 aaKnown RBP20.8■□□□□ 0.92
LINC01225-203ENST00000563550 L3MBTL3Q96JM7 780 aaPredicted RBP20.8■□□□□ 0.92
LINC01225-203ENST00000563550 BICC1Q9H694 974 aaKnown RBP20.8■□□□□ 0.92
LINC01225-203ENST00000563550 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms