RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 WDR43Q15061 677 aaKnown RBP eCLIP21.93■■□□□ 1.1
HDGFL3-203ENST00000563404 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
HDGFL3-203ENST00000563404 MPNDQ8N594 471 aa21.93■■□□□ 1.1
HDGFL3-203ENST00000563404 ABT1Q9ULW3 272 aaKnown RBP21.93■■□□□ 1.1
HDGFL3-203ENST00000563404 DUOX1Q9NRD9 1551 aa21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 WDR33Q9C0J8 1336 aaKnown RBP21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 KIAA2012Q0VF49 1180 aa21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 CST9Q5W186 159 aa21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 PLBD2Q8NHP8 589 aa21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 ISCA1Q9BUE6 129 aa21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
HDGFL3-203ENST00000563404 HOXB7P09629 217 aa21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 GMPSP49915 693 aaPredicted RBP21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 ANKRD13DQ6ZTN6 518 aa21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 PRDM10Q9NQV6 1147 aa21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 ADARB2Q9NS39 739 aaKnown RBP21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 COL4A1P02462 1669 aa21.91■■□□□ 1.1
HDGFL3-203ENST00000563404 YDJCA8MPS7 323 aa21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 CTCFP49711 727 aaPredicted RBP21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 AIDAQ96BJ3 306 aa21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 FAM89AQ96GI7 184 aa21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 CFAP44Q96MT7 982 aa21.9■■□□□ 1.1
HDGFL3-203ENST00000563404 RAD17O75943 681 aa21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 DUSP27Q5VZP5 1158 aa21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 CIAPIN1Q6FI81 312 aa21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 DBF4Q9UBU7 674 aaPredicted RBP21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 LRRC37AA6NMS7 1700 aa21.89■■□□□ 1.09
HDGFL3-203ENST00000563404 LBX1P52954 281 aa21.88■■□□□ 1.09
HDGFL3-203ENST00000563404 CELF1Q92879 486 aaKnown RBP21.88■■□□□ 1.09
HDGFL3-203ENST00000563404 SHTN1A0MZ66 631 aa21.87■■□□□ 1.09
HDGFL3-203ENST00000563404 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
HDGFL3-203ENST00000563404 HIRAP54198 1017 aaPredicted RBP21.87■■□□□ 1.09
HDGFL3-203ENST00000563404 SF3B3Q15393 1217 aaKnown RBP21.87■■□□□ 1.09
HDGFL3-203ENST00000563404 TRPM7Q96QT4 1865 aa21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 HSPA8P11142 646 aaKnown RBP21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 CYP4F22Q6NT55 531 aa21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 HYPKQ9NX55 129 aa21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 PGAP2Q9UHJ9 254 aa21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 THSD7BQ9C0I4 1608 aa21.86■■□□□ 1.09
HDGFL3-203ENST00000563404 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
HDGFL3-203ENST00000563404 TRPM4Q8TD43 1214 aa21.85■■□□□ 1.09
HDGFL3-203ENST00000563404 CAPNS2Q96L46 248 aa21.85■■□□□ 1.09
HDGFL3-203ENST00000563404 GLIS2Q9BZE0 524 aaPredicted RBP21.85■■□□□ 1.09
HDGFL3-203ENST00000563404 TLL2Q9Y6L7 1015 aa21.85■■□□□ 1.09
HDGFL3-203ENST00000563404 TRIM28Q13263 835 aaKnown RBP21.84■■□□□ 1.09
HDGFL3-203ENST00000563404 TNIP1Q15025 636 aa21.84■■□□□ 1.09
HDGFL3-203ENST00000563404 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
HDGFL3-203ENST00000563404 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 GPSM2P81274 684 aa21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 MAP2K1Q02750 393 aaPredicted RBP21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 POLLQ9UGP5 575 aa21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
HDGFL3-203ENST00000563404 IRS4O14654 1257 aaPredicted RBP21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 APAF1O14727 1248 aa21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 GRM1Q13255 1194 aa21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 PAXIP1Q6ZW49 1069 aaPredicted RBP21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 NSFL1CQ9UNZ2 370 aaKnown RBP21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 ZBTB12Q9Y330 459 aaPredicted RBP21.82■■□□□ 1.08
HDGFL3-203ENST00000563404 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
HDGFL3-203ENST00000563404 CELF2O95319 508 aaKnown RBP21.81■■□□□ 1.08
HDGFL3-203ENST00000563404 WASHC4Q2M389 1173 aa21.81■■□□□ 1.08
HDGFL3-203ENST00000563404 GPR101Q96P66 508 aaPredicted RBP21.81■■□□□ 1.08
HDGFL3-203ENST00000563404 DBNDD1Q9H9R9 158 aa21.81■■□□□ 1.08
HDGFL3-203ENST00000563404 PSMD14O00487 310 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 RIMBP2O15034 1052 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 ECE1P42892 770 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 SAPCD2Q86UD0 394 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 MICALL2Q8IY33 904 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 KCNQ5Q9NR82 932 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
HDGFL3-203ENST00000563404 AOC2O75106 756 aa21.79■■□□□ 1.08
HDGFL3-203ENST00000563404 DLK2Q6UY11 383 aa21.79■■□□□ 1.08
HDGFL3-203ENST00000563404 RIC3Q7Z5B4 369 aa21.79■■□□□ 1.08
HDGFL3-203ENST00000563404 ZBTB38Q8NAP3 1195 aaPredicted RBP21.79■■□□□ 1.08
HDGFL3-203ENST00000563404 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
HDGFL3-203ENST00000563404 RTL9Q8NET4 1388 aa21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 C6orf229H3BNL8 230 aa21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 EGFRP00533 1210 aa21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 RPS8P62241 208 aaKnown RBP21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 C8orf58Q8NAV2 365 aa21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 MYD88Q99836 296 aa21.78■■□□□ 1.08
HDGFL3-203ENST00000563404 H7C1D1 291 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 GNAI1P63096 354 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 GOLGA2Q08379 1002 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 DOK7Q18PE1 504 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 SAMD7Q7Z3H4 446 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 TBC1D16Q8TBP0 767 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 DPF2Q92785 391 aa21.77■■□□□ 1.08
HDGFL3-203ENST00000563404 ECE2O60344 883 aa21.76■■□□□ 1.07
HDGFL3-203ENST00000563404 CDC37L1Q7L3B6 337 aa21.76■■□□□ 1.07
HDGFL3-203ENST00000563404 JARID2Q92833 1246 aaPredicted RBP21.76■■□□□ 1.07
HDGFL3-203ENST00000563404 ZNF408Q9H9D4 720 aa21.76■■□□□ 1.07
HDGFL3-203ENST00000563404 USP48Q86UV5 1035 aa21.75■■□□□ 1.07
HDGFL3-203ENST00000563404 MAP2K2P36507 400 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms