RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 TPM3P06753 285 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 GUCY1B3Q02153 619 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 SPTLC3Q9NUV7 552 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
CX3CL1-202ENST00000563383 SLIT1O75093 1534 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 RGS12O14924 1447 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 AACSQ86V21 672 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 FAM227BQ96M60 508 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
CX3CL1-202ENST00000563383 RAD50Q92878 1312 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 CABP4P57796 275 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 CACTINQ8WUQ7 758 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 KIF1BPQ96EK5 621 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 FSD1Q9BTV5 496 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 NR1I2O75469 434 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 FAM177A1Q8N128 213 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 MON2Q7Z3U7 1717 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 RBM8AQ9Y5S9 174 aaKnown RBP12.11□□□□□ -0.47
CX3CL1-202ENST00000563383 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 SKILP12757 684 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 MYD88Q99836 296 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
CX3CL1-202ENST00000563383 JAK2O60674 1132 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 ELF2Q15723 593 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 APPP05067 770 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 GTF2F1P35269 517 aaKnown RBP eCLIP12.09□□□□□ -0.471e-7■■■□□ 15.6
CX3CL1-202ENST00000563383 ZNF75DP51815 510 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 CCDC144BQ3MJ40 725 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 CCDC144CPQ8IYA2 1237 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 POLR3GO15318 223 aaPredicted RBP12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 GPATCH3Q96I76 525 aa12.09□□□□□ -0.47
CX3CL1-202ENST00000563383 SMTNL1A8MU46 457 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 SMC2O95347 1197 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 FTOQ9C0B1 505 aaKnown RBP eCLIP12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 ERBB3P21860 1342 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 BIN1O00499 593 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 GLRX3O76003 335 aaKnown RBP12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 TTC14Q96N46 770 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 NPHP3Q7Z494 1330 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
CX3CL1-202ENST00000563383 ANKARQ7Z5J8 1434 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 KDRP35968 1356 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 CCAR2Q8N163 923 aaKnown RBP12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 STAP2Q9UGK3 403 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 PDCP20941 246 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 ME1P48163 572 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 TAF6LQ9Y6J9 622 aa12.07□□□□□ -0.48
CX3CL1-202ENST00000563383 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms