RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KDM2BQ8NHM5 1336 aa36.11■■■■□ 3.37
NME3-203ENST00000563367 F6X3S4 739 aa36.11■■■■□ 3.37
NME3-203ENST00000563367 C1QTNF8P60827 252 aa36.11■■■■□ 3.37
NME3-203ENST00000563367 GLTPD2A6NH11 291 aa36.1■■■■□ 3.37
NME3-203ENST00000563367 CDHR2Q9BYE9 1310 aa36.09■■■■□ 3.37
NME3-203ENST00000563367 PDE8AO60658 829 aa36.09■■■■□ 3.37
NME3-203ENST00000563367 GRIPAP1Q4V328 841 aa36.09■■■■□ 3.37
NME3-203ENST00000563367 SP8Q8IXZ3 490 aa36.09■■■■□ 3.37
NME3-203ENST00000563367 CELF1Q92879 486 aaKnown RBP36.09■■■■□ 3.37
NME3-203ENST00000563367 HSP90B1P14625 803 aaKnown RBP36.08■■■■□ 3.37
NME3-203ENST00000563367 IARSP41252 1262 aaKnown RBP36.08■■■■□ 3.37
NME3-203ENST00000563367 LINS1Q8NG48 757 aa36.08■■■■□ 3.37
NME3-203ENST00000563367 LRRC37AA6NMS7 1700 aa36.08■■■■□ 3.37
NME3-203ENST00000563367 GCKRQ14397 625 aa36.07■■■■□ 3.36
NME3-203ENST00000563367 RRAGCQ9HB90 399 aa36.07■■■■□ 3.36
NME3-203ENST00000563367 H7C1W4 665 aa36.06■■■■□ 3.36
NME3-203ENST00000563367 MRPL50Q8N5N7 158 aaKnown RBP36.06■■■■□ 3.36
NME3-203ENST00000563367 COL4A5P29400 1685 aa36.05■■■■□ 3.36
NME3-203ENST00000563367 TMX4Q9H1E5 349 aaPredicted RBP36.05■■■■□ 3.36
NME3-203ENST00000563367 SEC31BQ9NQW1 1179 aa36.05■■■■□ 3.36
NME3-203ENST00000563367 UBE3BQ7Z3V4 1068 aa36.04■■■■□ 3.36
NME3-203ENST00000563367 SSH1Q8WYL5 1049 aa36.04■■■■□ 3.36
NME3-203ENST00000563367 BEND3Q5T5X7 828 aa36.03■■■■□ 3.36
NME3-203ENST00000563367 CCDC85AQ96PX6 553 aaPredicted RBP36.03■■■■□ 3.36
NME3-203ENST00000563367 CASP7P55210 303 aa36.02■■■■□ 3.36
NME3-203ENST00000563367 CCDC152Q4G0S7 254 aa36.02■■■■□ 3.36
NME3-203ENST00000563367 DPY19L2Q6NUT2 758 aa36.02■■■■□ 3.36
NME3-203ENST00000563367 TMC4Q7Z404 712 aa36.02■■■■□ 3.36
NME3-203ENST00000563367 WDR90Q96KV7 1748 aa36.02■■■■□ 3.36
NME3-203ENST00000563367 CTSWP56202 376 aa36■■■■□ 3.35
NME3-203ENST00000563367 RPS8P62241 208 aaKnown RBP36■■■■□ 3.35
NME3-203ENST00000563367 MPNDQ8N594 471 aa36■■■■□ 3.35
NME3-203ENST00000563367 RTFDC1Q9BY42 306 aaPredicted RBP36■■■■□ 3.35
NME3-203ENST00000563367 DPP8Q6V1X1 898 aaPredicted RBP35.99■■■■□ 3.35
NME3-203ENST00000563367 BCL2L13Q9BXK5 485 aa35.99■■■■□ 3.35
NME3-203ENST00000563367 DUOX1Q9NRD9 1551 aa35.98■■■■□ 3.35
NME3-203ENST00000563367 DDNO94850 711 aaPredicted RBP35.98■■■■□ 3.35
NME3-203ENST00000563367 TTLL11Q8NHH1 800 aa35.98■■■■□ 3.35
NME3-203ENST00000563367 ZNF541Q9H0D2 1346 aa35.98■■■■□ 3.35
NME3-203ENST00000563367 SPEF2Q9C093 1822 aa35.97■■■■□ 3.35
NME3-203ENST00000563367 POTECB2RU33 542 aa35.97■■■■□ 3.35
NME3-203ENST00000563367 FZD9O00144 591 aa35.96■■■■□ 3.35
NME3-203ENST00000563367 HNRNPUQ00839 825 aaKnown RBP eCLIP35.96■■■■□ 3.35
NME3-203ENST00000563367 SLC4A10Q6U841 1118 aa35.96■■■■□ 3.35
NME3-203ENST00000563367 LARGE2Q8N3Y3 721 aa35.96■■■■□ 3.35
NME3-203ENST00000563367 LTBP1Q14766 1721 aa35.95■■■■□ 3.35
NME3-203ENST00000563367 ALDH1L2Q3SY69 923 aa35.95■■■■□ 3.35
NME3-203ENST00000563367 JDP2Q8WYK2 163 aa35.95■■■■□ 3.35
NME3-203ENST00000563367 PLA2G12BQ9BX93 195 aa35.95■■■■□ 3.35
NME3-203ENST00000563367 PPIP5K2O43314 1243 aa35.94■■■■□ 3.34
NME3-203ENST00000563367 TOMM70O94826 608 aa35.94■■■■□ 3.34
NME3-203ENST00000563367 AOC3Q16853 763 aa35.94■■■■□ 3.34
NME3-203ENST00000563367 SUPT20HQ8NEM7 779 aa35.94■■■■□ 3.34
NME3-203ENST00000563367 GREM2Q9H772 168 aa35.94■■■■□ 3.34
NME3-203ENST00000563367 VEGFAP15692 232 aaPredicted RBP35.93■■■■□ 3.34
NME3-203ENST00000563367 GPSM2P81274 684 aa35.92■■■■□ 3.34
NME3-203ENST00000563367 NSFL1CQ9UNZ2 370 aaKnown RBP35.92■■■■□ 3.34
NME3-203ENST00000563367 PTPRCP08575 1304 aa35.91■■■■□ 3.34
NME3-203ENST00000563367 CT47B1P0C2W7 299 aaPredicted RBP35.91■■■■□ 3.34
NME3-203ENST00000563367 C16orf71Q8IYS4 520 aaPredicted RBP35.91■■■■□ 3.34
NME3-203ENST00000563367 VPS33BQ9H267 617 aa35.91■■■■□ 3.34
NME3-203ENST00000563367 SMC4Q9NTJ3 1288 aa35.91■■■■□ 3.34
NME3-203ENST00000563367 RTL9Q8NET4 1388 aa35.9■■■■□ 3.34
NME3-203ENST00000563367 SRCIN1Q9C0H9 1055 aa35.9■■■■□ 3.34
NME3-203ENST00000563367 ALDH1L1O75891 902 aa35.89■■■■□ 3.34
NME3-203ENST00000563367 ANKRD18AQ8IVF6 992 aa35.89■■■■□ 3.34
NME3-203ENST00000563367 SCN4AP35499 1836 aa35.88■■■■□ 3.33
NME3-203ENST00000563367 CSF1RP07333 972 aa35.88■■■■□ 3.33
NME3-203ENST00000563367 NIM1KQ8IY84 436 aa35.88■■■■□ 3.33
NME3-203ENST00000563367 GRM8O00222 908 aa35.87■■■■□ 3.33
NME3-203ENST00000563367 KIAA2012Q0VF49 1180 aa35.87■■■■□ 3.33
NME3-203ENST00000563367 POLLQ9UGP5 575 aa35.87■■■■□ 3.33
NME3-203ENST00000563367 FOXO4P98177 505 aa35.86■■■■□ 3.33
NME3-203ENST00000563367 RBM46Q8TBY0 533 aaKnown RBP35.86■■■■□ 3.33
NME3-203ENST00000563367 L3MBTL3Q96JM7 780 aaPredicted RBP35.86■■■■□ 3.33
NME3-203ENST00000563367 CDC5LQ99459 802 aaKnown RBP35.86■■■■□ 3.33
NME3-203ENST00000563367 EIF6P56537 245 aaKnown RBP35.85■■■■□ 3.33
NME3-203ENST00000563367 FAM161AQ3B820 660 aa35.85■■■■□ 3.33
NME3-203ENST00000563367 C9orf78Q9NZ63 289 aaPredicted RBP35.84■■■■□ 3.33
NME3-203ENST00000563367 C6orf229H3BNL8 230 aa35.83■■■■□ 3.33
NME3-203ENST00000563367 EPHA10Q5JZY3 1008 aa35.83■■■■□ 3.33
NME3-203ENST00000563367 GPC2Q8N158 579 aa35.83■■■■□ 3.33
NME3-203ENST00000563367 TBC1D16Q8TBP0 767 aa35.83■■■■□ 3.33
NME3-203ENST00000563367 PODXL2Q9NZ53 605 aa35.83■■■■□ 3.33
NME3-203ENST00000563367 ITGA6P23229 1130 aa35.82■■■■□ 3.32
NME3-203ENST00000563367 RARSP54136 660 aaKnown RBP35.82■■■■□ 3.32
NME3-203ENST00000563367 GPR101Q96P66 508 aaPredicted RBP35.82■■■■□ 3.32
NME3-203ENST00000563367 ZNRF3Q9ULT6 936 aa35.82■■■■□ 3.32
NME3-203ENST00000563367 WASHC4Q2M389 1173 aa35.81■■■■□ 3.32
NME3-203ENST00000563367 GJA3Q9Y6H8 435 aa35.81■■■■□ 3.32
NME3-203ENST00000563367 BSDC1Q9NW68 430 aaPredicted RBP35.8■■■■□ 3.32
NME3-203ENST00000563367 ANKIB1Q9P2G1 1089 aa35.8■■■■□ 3.32
NME3-203ENST00000563367 NOB1Q9ULX3 412 aaKnown RBP35.8■■■■□ 3.32
NME3-203ENST00000563367 RIMBP2O15034 1052 aa35.79■■■■□ 3.32
NME3-203ENST00000563367 BRPF1P55201 1214 aaPredicted RBP35.79■■■■□ 3.32
NME3-203ENST00000563367 NBPF7P0C2Y1 421 aaPredicted RBP35.78■■■■□ 3.32
NME3-203ENST00000563367 MINPP1Q9UNW1 487 aa35.78■■■■□ 3.32
NME3-203ENST00000563367 UTYO14607 1347 aa35.78■■■■□ 3.32
NME3-203ENST00000563367 UFL1O94874 794 aa35.77■■■■□ 3.32
NME3-203ENST00000563367 CXCL9Q07325 125 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms