RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 HTTP42858 3142 aa10.44□□□□□ -0.74
HERPUD1-206ENST00000563343 USP48Q86UV5 1035 aa10.44□□□□□ -0.74
HERPUD1-206ENST00000563343 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
HERPUD1-206ENST00000563343 CSRNP1Q96S65 589 aa10.44□□□□□ -0.74
HERPUD1-206ENST00000563343 LAMB1P07942 1786 aa10.44□□□□□ -0.74
HERPUD1-206ENST00000563343 YDJCA8MPS7 323 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 NTSR2O95665 410 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 SLC10A3P09131 477 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 HABP4Q5JVS0 413 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 SUSD4Q5VX71 490 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 GCC1Q96CN9 775 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 RBM17Q96I25 401 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 GBA2Q9HCG7 927 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 CNOT7Q9UIV1 285 aaKnown RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 KNSTRNQ9Y448 316 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 ATP6V0A2Q9Y487 856 aa10.43□□□□□ -0.74
HERPUD1-206ENST00000563343 ERVV-1B6SEH8 477 aa10.42□□□□□ -0.74
HERPUD1-206ENST00000563343 RAD17O75943 681 aa10.42□□□□□ -0.74
HERPUD1-206ENST00000563343 EGFRP00533 1210 aa10.42□□□□□ -0.74
HERPUD1-206ENST00000563343 KIAA2012Q0VF49 1180 aa10.42□□□□□ -0.74
HERPUD1-206ENST00000563343 ABCC4O15439 1325 aa10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 MAP3K15Q6ZN16 1313 aa10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 HSPA5P11021 654 aaKnown RBP10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 BCL2L13Q9BXK5 485 aa10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 COL4A1P02462 1669 aa10.41□□□□□ -0.74
HERPUD1-206ENST00000563343 ZNF646O15015 1829 aaPredicted RBP10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 ADM5C9JUS6 153 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 GPTP24298 496 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 ZNF157P51786 506 aaPredicted RBP10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 TNIP1Q15025 636 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 PKN2Q16513 984 aaKnown RBP10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 KRT26Q7Z3Y9 468 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 RASAL3Q86YV0 1011 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 MICALL2Q8IY33 904 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 C2orf69Q8N8R5 385 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 SUPT20HQ8NEM7 779 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 DPF2Q92785 391 aa10.4□□□□□ -0.74
HERPUD1-206ENST00000563343 CENPFP49454 3210 aa10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 FXR1P51114 621 aaKnown RBP eCLIP10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 SP8Q8IXZ3 490 aa10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 ZNF296Q8WUU4 475 aaPredicted RBP10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
HERPUD1-206ENST00000563343 H7C1D1 291 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 U2SURPO15042 1029 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 TBC1D10BQ4KMP7 808 aaPredicted RBP10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 DPP8Q6V1X1 898 aaPredicted RBP10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 MCM10Q7L590 875 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 MPNDQ8N594 471 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 BRCA2P51587 3418 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
HERPUD1-206ENST00000563343 PSMD14O00487 310 aa10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 PRKAR2BP31323 418 aa10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 NOM1Q5C9Z4 860 aaKnown RBP10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 FBXO46Q6PJ61 603 aaPredicted RBP10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 NLRP3Q96P20 1036 aa10.37□□□□□ -0.75
HERPUD1-206ENST00000563343 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-206ENST00000563343 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
HERPUD1-206ENST00000563343 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
HERPUD1-206ENST00000563343 ZBTB3Q9H5J0 574 aa10.36□□□□□ -0.75
HERPUD1-206ENST00000563343 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
HERPUD1-206ENST00000563343 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 ZNF609O15014 1411 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 BBOX1O75936 387 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 TBC1D8O95759 1140 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 LRP10Q7Z4F1 713 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 PPP1R42Q7Z4L9 355 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 DCPSQ96C86 337 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 KCNQ5Q9NR82 932 aa10.35□□□□□ -0.75
HERPUD1-206ENST00000563343 GPR25O00155 361 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 GRAPQ13588 217 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 PARP10Q53GL7 1025 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 KIF6Q6ZMV9 814 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 GRAPLQ8TC17 118 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 TMX4Q9H1E5 349 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 MIS18AQ9NYP9 233 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 GGA3Q9NZ52 723 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
HERPUD1-206ENST00000563343 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 HTATSF1O43719 755 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 MYL6BP14649 208 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms