RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
CNOT1-204ENST00000563130 PARP10Q53GL7 1025 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 SUSD4Q5VX71 490 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 G2E3Q7L622 706 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 ISCA1Q9BUE6 129 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 NTSR2O95665 410 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 GPTP24298 496 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 NLRP10Q86W26 655 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 ZNF428Q96B54 188 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 ADCY9O60503 1353 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 ANKRD31Q8N7Z5 1873 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 ZBED9Q6R2W3 1325 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 RIC1Q4ADV7 1423 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 BRCA1P38398 1863 aaKnown RBP7.93□□□□□ -1.14
CNOT1-204ENST00000563130 ANKRD36CQ5JPF3 1778 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
CNOT1-204ENST00000563130 CT47B1P0C2W7 299 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-204ENST00000563130 YBX3P16989 372 aaKnown RBP eCLIP7.93□□□□□ -1.143e-7■■□□□ 12.2
CNOT1-204ENST00000563130 FLIIQ13045 1269 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 KSR2Q6VAB6 950 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 OTUD5Q96G74 571 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 NYXQ9GZU5 481 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 PDZRN3Q9UPQ7 1066 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 CACNA1FO60840 1977 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-204ENST00000563130 ARFGEF2Q9Y6D5 1785 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 ABCC12Q96J65 1359 aa7.93□□□□□ -1.14
CNOT1-204ENST00000563130 PI4KAP2A4QPH2 592 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 CHRNA5P30532 468 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 PDE6BP35913 854 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 ST5P78524 1137 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 SLC10A5Q5PT55 438 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 PPP1R42Q7Z4L9 355 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 RIC3Q7Z5B4 369 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 PI4KAP1Q8N8J0 262 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-204ENST00000563130 FAM177BA6PVY3 158 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 SRGNP10124 158 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 HOMEZQ8IX15 550 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 UTP14AQ9BVJ6 771 aaKnown RBP7.92□□□□□ -1.14
CNOT1-204ENST00000563130 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 MAP3K2Q9Y2U5 619 aa7.92□□□□□ -1.14
CNOT1-204ENST00000563130 DLEC1Q9Y238 1755 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 ATP5J2-PTCD1G3V325 749 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 H0YIN7 160 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 GPR162Q16538 588 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 CRY2Q49AN0 593 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 SSH1Q8WYL5 1049 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 NPHP1O15259 732 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 IGKV5-2P06315 115 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 COL11A2P13942 1736 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-204ENST00000563130 ALDH1L2Q3SY69 923 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 C2CD5Q86YS7 1000 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 MRPL50Q8N5N7 158 aaKnown RBP7.91□□□□□ -1.14
CNOT1-204ENST00000563130 CCDC191Q8NCU4 936 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 MYD88Q99836 296 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
CNOT1-204ENST00000563130 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
CNOT1-204ENST00000563130 GTF2E1P29083 439 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-204ENST00000563130 BRPF1P55201 1214 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-204ENST00000563130 FKBP5Q13451 457 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-204ENST00000563130 TRMT112Q9UI30 125 aaKnown RBP7.9□□□□□ -1.14
CNOT1-204ENST00000563130 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
CNOT1-204ENST00000563130 TNRC6CQ9HCJ0 1690 aaKnown RBP7.9□□□□□ -1.14
CNOT1-204ENST00000563130 DALRD3Q5D0E6 543 aaKnown RBP7.9□□□□□ -1.15
CNOT1-204ENST00000563130 STYK1Q6J9G0 422 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 SYNE4Q8N205 404 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 SLAIN1Q8ND83 568 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 DNAAF4Q8WXU2 420 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 MASTLQ96GX5 879 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 BCS1LQ9Y276 419 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.15
CNOT1-204ENST00000563130 HOXA10P31260 410 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-204ENST00000563130 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 ZBTB38Q8NAP3 1195 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-204ENST00000563130 FAM89AQ96GI7 184 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 ARFGEF1Q9Y6D6 1849 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 NEURL1BA8MQ27 555 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 F6X3S4 739 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 NPR1P16066 1061 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 RARSP54136 660 aaKnown RBP7.89□□□□□ -1.15
CNOT1-204ENST00000563130 NEXNQ0ZGT2 675 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 CWF19L2Q2TBE0 894 aaKnown RBP7.89□□□□□ -1.15
CNOT1-204ENST00000563130 BEND3Q5T5X7 828 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 LINS1Q8NG48 757 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 CNKSR1Q969H4 720 aa7.89□□□□□ -1.15
CNOT1-204ENST00000563130 CWC25Q9NXE8 425 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-204ENST00000563130 PTPRCP08575 1304 aa7.88□□□□□ -1.15
CNOT1-204ENST00000563130 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-204ENST00000563130 HCLS1P14317 486 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-204ENST00000563130 C7orf43Q8WVR3 580 aa7.88□□□□□ -1.15
CNOT1-204ENST00000563130 ZNF622Q969S3 477 aaKnown RBP eCLIP7.88□□□□□ -1.15
CNOT1-204ENST00000563130 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
CNOT1-204ENST00000563130 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
CNOT1-204ENST00000563130 H7C1W4 665 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 GCKRQ14397 625 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms