RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DPEP1P16444 411 aa23.6■■□□□ 1.37
RAB40C-207ENST00000563109 SF3B3Q15393 1217 aaKnown RBP23.6■■□□□ 1.37
RAB40C-207ENST00000563109 NLGN2Q8NFZ4 835 aa23.6■■□□□ 1.37
RAB40C-207ENST00000563109 ZNF622Q969S3 477 aaKnown RBP eCLIP23.6■■□□□ 1.37
RAB40C-207ENST00000563109 RBM17Q96I25 401 aaKnown RBP23.6■■□□□ 1.37
RAB40C-207ENST00000563109 A0A0G2JLW4 131 aa23.59■■□□□ 1.37
RAB40C-207ENST00000563109 GNAI2P04899 355 aa23.59■■□□□ 1.37
RAB40C-207ENST00000563109 STYK1Q6J9G0 422 aa23.59■■□□□ 1.37
RAB40C-207ENST00000563109 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
RAB40C-207ENST00000563109 BICC1Q9H694 974 aaKnown RBP23.58■■□□□ 1.37
RAB40C-207ENST00000563109 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
RAB40C-207ENST00000563109 LRRFIP2Q9Y608 721 aaKnown RBP23.58■■□□□ 1.37
RAB40C-207ENST00000563109 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-207ENST00000563109 FOXO4P98177 505 aa23.57■■□□□ 1.36
RAB40C-207ENST00000563109 TTLL11Q8NHH1 800 aa23.57■■□□□ 1.36
RAB40C-207ENST00000563109 CNKSR1Q969H4 720 aa23.57■■□□□ 1.36
RAB40C-207ENST00000563109 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-207ENST00000563109 RTL9Q8NET4 1388 aa23.56■■□□□ 1.36
RAB40C-207ENST00000563109 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-207ENST00000563109 LMBR1LQ6UX01 489 aa23.56■■□□□ 1.36
RAB40C-207ENST00000563109 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
RAB40C-207ENST00000563109 ALDH1B1P30837 517 aa23.55■■□□□ 1.36
RAB40C-207ENST00000563109 EPHA10Q5JZY3 1008 aa23.55■■□□□ 1.36
RAB40C-207ENST00000563109 KAZALD1Q96I82 304 aa23.55■■□□□ 1.36
RAB40C-207ENST00000563109 CRAMP1Q96RY5 1269 aa23.55■■□□□ 1.36
RAB40C-207ENST00000563109 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
RAB40C-207ENST00000563109 SPEF2Q9C093 1822 aa23.54■■□□□ 1.36
RAB40C-207ENST00000563109 CSF1RP07333 972 aa23.54■■□□□ 1.36
RAB40C-207ENST00000563109 FAM161AQ3B820 660 aa23.54■■□□□ 1.36
RAB40C-207ENST00000563109 RABL6Q3YEC7 729 aaPredicted RBP23.54■■□□□ 1.36
RAB40C-207ENST00000563109 TTLL6Q8N841 843 aa23.54■■□□□ 1.36
RAB40C-207ENST00000563109 GREM2Q9H772 168 aa23.54■■□□□ 1.36
RAB40C-207ENST00000563109 KCNA3P22001 575 aa23.53■■□□□ 1.36
RAB40C-207ENST00000563109 IFIT5Q13325 482 aaKnown RBP23.53■■□□□ 1.36
RAB40C-207ENST00000563109 ANKRD44Q8N8A2 993 aa23.53■■□□□ 1.36
RAB40C-207ENST00000563109 CDC5LQ99459 802 aaKnown RBP23.53■■□□□ 1.36
RAB40C-207ENST00000563109 TAF1P21675 1872 aa23.53■■□□□ 1.36
RAB40C-207ENST00000563109 ANKRD18BA2A2Z9 1011 aa23.52■■□□□ 1.36
RAB40C-207ENST00000563109 ITGA6P23229 1130 aa23.52■■□□□ 1.36
RAB40C-207ENST00000563109 GRAPQ13588 217 aa23.52■■□□□ 1.36
RAB40C-207ENST00000563109 CCDC57Q2TAC2 916 aa23.52■■□□□ 1.36
RAB40C-207ENST00000563109 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
RAB40C-207ENST00000563109 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
RAB40C-207ENST00000563109 C1orf115Q9H7X2 142 aa23.52■■□□□ 1.36
RAB40C-207ENST00000563109 TAF7LQ5H9L4 462 aa23.51■■□□□ 1.35
RAB40C-207ENST00000563109 PRPF40BQ6NWY9 871 aaKnown RBP23.51■■□□□ 1.35
RAB40C-207ENST00000563109 ZBTB40Q9NUA8 1239 aa23.51■■□□□ 1.35
RAB40C-207ENST00000563109 ARFGEF1Q9Y6D6 1849 aa23.51■■□□□ 1.35
RAB40C-207ENST00000563109 SLX4Q8IY92 1834 aa23.5■■□□□ 1.35
RAB40C-207ENST00000563109 SEC31BQ9NQW1 1179 aa23.5■■□□□ 1.35
RAB40C-207ENST00000563109 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
RAB40C-207ENST00000563109 PPEF1O14829 653 aaPredicted RBP23.49■■□□□ 1.35
RAB40C-207ENST00000563109 IGHMBP2P38935 993 aaKnown RBP23.49■■□□□ 1.35
RAB40C-207ENST00000563109 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
RAB40C-207ENST00000563109 ANKRD18AQ8IVF6 992 aa23.49■■□□□ 1.35
RAB40C-207ENST00000563109 BCS1LQ9Y276 419 aa23.49■■□□□ 1.35
RAB40C-207ENST00000563109 BBOX1O75936 387 aa23.48■■□□□ 1.35
RAB40C-207ENST00000563109 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-207ENST00000563109 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
RAB40C-207ENST00000563109 TMX4Q9H1E5 349 aaPredicted RBP23.48■■□□□ 1.35
RAB40C-207ENST00000563109 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
RAB40C-207ENST00000563109 RPS8P62241 208 aaKnown RBP23.47■■□□□ 1.35
RAB40C-207ENST00000563109 MTX1Q13505 466 aa23.47■■□□□ 1.35
RAB40C-207ENST00000563109 AAMPQ13685 434 aa23.47■■□□□ 1.35
RAB40C-207ENST00000563109 CELF1Q92879 486 aaKnown RBP23.47■■□□□ 1.35
RAB40C-207ENST00000563109 LRRC37AA6NMS7 1700 aa23.47■■□□□ 1.35
RAB40C-207ENST00000563109 COL4A1P02462 1669 aa23.46■■□□□ 1.35
RAB40C-207ENST00000563109 NEFLP07196 543 aa23.46■■□□□ 1.35
RAB40C-207ENST00000563109 MPHOSPH8Q99549 860 aa23.46■■□□□ 1.35
RAB40C-207ENST00000563109 SOGA3Q5TF21 947 aa23.45■■□□□ 1.34
RAB40C-207ENST00000563109 CEP85Q6P2H3 762 aa23.44■■□□□ 1.34
RAB40C-207ENST00000563109 EXOC6Q8TAG9 804 aa23.44■■□□□ 1.34
RAB40C-207ENST00000563109 ZNF219Q9P2Y4 722 aaPredicted RBP23.44■■□□□ 1.34
RAB40C-207ENST00000563109 ATP8B2P98198 1209 aa23.43■■□□□ 1.34
RAB40C-207ENST00000563109 RPAP2Q8IXW5 612 aaPredicted RBP23.43■■□□□ 1.34
RAB40C-207ENST00000563109 C21orf2O43822 256 aa23.42■■□□□ 1.34
RAB40C-207ENST00000563109 HMMRO75330 724 aa23.42■■□□□ 1.34
RAB40C-207ENST00000563109 GPR162Q16538 588 aa23.42■■□□□ 1.34
RAB40C-207ENST00000563109 CC2D2BQ6DHV5 1058 aa23.42■■□□□ 1.34
RAB40C-207ENST00000563109 ZNF594Q96JF6 807 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-207ENST00000563109 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-207ENST00000563109 ATP6V0A2Q9Y487 856 aa23.42■■□□□ 1.34
RAB40C-207ENST00000563109 PNMA6EA0A0J9YXQ4 647 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 DCAF8L1A6NGE4 600 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 LDHAL6AQ6ZMR3 332 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 SP8Q8IXZ3 490 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
RAB40C-207ENST00000563109 RFX5P48382 616 aaPredicted RBP23.4■■□□□ 1.34
RAB40C-207ENST00000563109 A0A1B0GUL6 1792 aa23.4■■□□□ 1.34
RAB40C-207ENST00000563109 GRIPAP1Q4V328 841 aa23.39■■□□□ 1.33
RAB40C-207ENST00000563109 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
RAB40C-207ENST00000563109 SSH3Q8TE77 659 aa23.39■■□□□ 1.33
RAB40C-207ENST00000563109 YBX3P16989 372 aaKnown RBP eCLIP23.38■■□□□ 1.33
RAB40C-207ENST00000563109 PTPN12Q05209 780 aaKnown RBP23.38■■□□□ 1.33
RAB40C-207ENST00000563109 POLA2Q14181 598 aa23.38■■□□□ 1.33
RAB40C-207ENST00000563109 C7orf43Q8WVR3 580 aa23.38■■□□□ 1.33
RAB40C-207ENST00000563109 COPRSQ9NQ92 184 aa23.38■■□□□ 1.33
RAB40C-207ENST00000563109 FER1L6Q2WGJ9 1857 aa23.38■■□□□ 1.33
RAB40C-207ENST00000563109 RTKN2Q8IZC4 609 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms