RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 BICC1Q9H694 974 aaKnown RBP8.91□□□□□ -0.98
TCF4-216ENST00000562680 CCDC196A0A1B0GTZ2 297 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 BAG3O95817 575 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 TBC1D32Q96NH3 1257 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 SPATA31A6Q5VVP1 1343 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 NEURL1BA8MQ27 555 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 CPDO75976 1380 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 GOLIM4O00461 696 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 RRP12Q5JTH9 1297 aaKnown RBP8.9□□□□□ -0.98
TCF4-216ENST00000562680 FAM196AQ6ZSG2 479 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 SSH3Q8TE77 659 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 CCDC66A2RUB6 948 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
TCF4-216ENST00000562680 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
TCF4-216ENST00000562680 TFCP2L1Q9NZI6 479 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 C3P01024 1663 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 BICD2Q8TD16 824 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 STK32BQ9NY57 414 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 OVOS2A0A0G2JMS6 1433 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
TCF4-216ENST00000562680 BEND3Q5T5X7 828 aa8.9□□□□□ -0.99
TCF4-216ENST00000562680 PRPF40BQ6NWY9 871 aaKnown RBP8.9□□□□□ -0.99
TCF4-216ENST00000562680 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.99
TCF4-216ENST00000562680 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.99
TCF4-216ENST00000562680 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 PCCAP05165 728 aaPredicted RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 GZF1Q9H116 711 aaPredicted RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 FAM13BQ9NYF5 915 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 ZNF213O14771 459 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 SIK1P57059 783 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 HMGN5P82970 282 aaKnown RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 DRC7Q8IY82 874 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 CNBD1Q8NA66 436 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 USP16Q9Y5T5 823 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 MAP3K15Q6ZN16 1313 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 MST1RQ04912 1400 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 CASTP20810 708 aaKnown RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 KCNQ3O43525 872 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 LETM1O95202 739 aaPredicted RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 PIP4K2AP48426 406 aaPredicted RBP8.89□□□□□ -0.99
TCF4-216ENST00000562680 PPP4R3BQ5MIZ7 849 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 ZNF804AQ7Z570 1209 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 GNAT2P19087 354 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 CCDC178Q5BJE1 867 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 EYA3Q99504 573 aa8.89□□□□□ -0.99
TCF4-216ENST00000562680 USP5P45974 858 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 ERVV-1B6SEH8 477 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 KIAA2012Q0VF49 1180 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 IQCA1Q86XH1 822 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 LIMCH1Q9UPQ0 1083 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 MAPK8IP2Q13387 824 aaPredicted RBP8.88□□□□□ -0.99
TCF4-216ENST00000562680 MCMDC2Q4G0Z9 681 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 SUCLG2Q96I99 432 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 PA2G4Q9UQ80 394 aaKnown RBP8.88□□□□□ -0.99
TCF4-216ENST00000562680 CYP27B1O15528 508 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
TCF4-216ENST00000562680 CERKQ8TCT0 537 aa8.88□□□□□ -0.99
TCF4-216ENST00000562680 RBM17Q96I25 401 aaKnown RBP8.88□□□□□ -0.99
TCF4-216ENST00000562680 CRNKL1Q9BZJ0 848 aaKnown RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 MROH5Q6ZUA9 1318 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 RAD21O60216 631 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 PLCG2P16885 1265 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 KRT85P78386 507 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 PUM3Q15397 648 aaKnown RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 CNPY4Q8N129 248 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 JARID2Q92833 1246 aaPredicted RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 QTRT2Q9H974 415 aaKnown RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 IFT172Q9UG01 1749 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 BAG6P46379 1132 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 ADGRB2O60241 1585 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 GOLGA6L19H0YKK7 550 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 POLD1P28340 1107 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 RBM5P52756 815 aaKnown RBP eCLIP8.87□□□□□ -0.99
TCF4-216ENST00000562680 VPS53Q5VIR6 699 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 FAM89AQ96GI7 184 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
TCF4-216ENST00000562680 TNNI3KQ59H18 835 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 FPGT-TNNI3KV9GXZ4 949 aa8.87□□□□□ -0.99
TCF4-216ENST00000562680 SIGLEC1Q9BZZ2 1709 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 BECN2A8MW95 431 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
TCF4-216ENST00000562680 ITGA6P23229 1130 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 TFCP2Q12800 502 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 NFKBIBQ15653 356 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 CNNM2Q9H8M5 875 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 DENND2AQ9ULE3 1009 aa8.86□□□□□ -0.99
TCF4-216ENST00000562680 NOL7Q9UMY1 257 aaKnown RBP8.86□□□□□ -0.99
TCF4-216ENST00000562680 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.86□□□□□ -0.99
TCF4-216ENST00000562680 ZFP91Q96JP5 570 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms