RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
USB1-206ENST00000562534 UBTFL1P0CB47 393 aaPredicted RBP20.57■□□□□ 0.88
USB1-206ENST00000562534 FOXO4P98177 505 aa20.57■□□□□ 0.88
USB1-206ENST00000562534 N4BP2Q86UW6 1770 aaPredicted RBP20.57■□□□□ 0.88
USB1-206ENST00000562534 PRPF40BQ6NWY9 871 aaKnown RBP20.56■□□□□ 0.88
USB1-206ENST00000562534 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
USB1-206ENST00000562534 RLBP1P12271 317 aa20.55■□□□□ 0.88
USB1-206ENST00000562534 SOGA3Q5TF21 947 aa20.55■□□□□ 0.88
USB1-206ENST00000562534 TMX4Q9H1E5 349 aaPredicted RBP20.55■□□□□ 0.88
USB1-206ENST00000562534 KIAA1551Q9HCM1 1747 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 YBX3P16989 372 aaKnown RBP eCLIP20.54■□□□□ 0.88
USB1-206ENST00000562534 RPS8P62241 208 aaKnown RBP20.54■□□□□ 0.88
USB1-206ENST00000562534 GRAPQ13588 217 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 CC2D2BQ6DHV5 1058 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 LMBR1LQ6UX01 489 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 ITPRIPQ8IWB1 547 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
USB1-206ENST00000562534 PANK1Q8TE04 598 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
USB1-206ENST00000562534 CHMP4BQ9H444 224 aaKnown RBP20.54■□□□□ 0.88
USB1-206ENST00000562534 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
USB1-206ENST00000562534 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
USB1-206ENST00000562534 KAZALD1Q96I82 304 aa20.53■□□□□ 0.88
USB1-206ENST00000562534 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
USB1-206ENST00000562534 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
USB1-206ENST00000562534 RTL9Q8NET4 1388 aa20.52■□□□□ 0.88
USB1-206ENST00000562534 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
USB1-206ENST00000562534 C21orf2O43822 256 aa20.52■□□□□ 0.88
USB1-206ENST00000562534 IFIT5Q13325 482 aaKnown RBP20.52■□□□□ 0.88
USB1-206ENST00000562534 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
USB1-206ENST00000562534 MEIS3Q99687 375 aa20.52■□□□□ 0.88
USB1-206ENST00000562534 GREM2Q9H772 168 aa20.52■□□□□ 0.88
USB1-206ENST00000562534 DDX60Q8IY21 1712 aaKnown RBP20.52■□□□□ 0.88
USB1-206ENST00000562534 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
USB1-206ENST00000562534 ITGA6P23229 1130 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 RRP1P56182 461 aaKnown RBP20.51■□□□□ 0.87
USB1-206ENST00000562534 CCDC57Q2TAC2 916 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 RABL6Q3YEC7 729 aaPredicted RBP20.51■□□□□ 0.87
USB1-206ENST00000562534 ARHGAP27Q6ZUM4 889 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 SP8Q8IXZ3 490 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
USB1-206ENST00000562534 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 CHMP3Q9Y3E7 222 aa20.51■□□□□ 0.87
USB1-206ENST00000562534 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
USB1-206ENST00000562534 GNAI2P04899 355 aa20.5■□□□□ 0.87
USB1-206ENST00000562534 MVPQ14764 893 aaKnown RBP20.5■□□□□ 0.87
USB1-206ENST00000562534 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
USB1-206ENST00000562534 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
USB1-206ENST00000562534 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
USB1-206ENST00000562534 ATP6V0A2Q9Y487 856 aa20.5■□□□□ 0.87
USB1-206ENST00000562534 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
USB1-206ENST00000562534 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
USB1-206ENST00000562534 IGHMBP2P38935 993 aaKnown RBP20.48■□□□□ 0.87
USB1-206ENST00000562534 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
USB1-206ENST00000562534 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
USB1-206ENST00000562534 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
USB1-206ENST00000562534 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
USB1-206ENST00000562534 COL11A2P13942 1736 aaPredicted RBP20.47■□□□□ 0.87
USB1-206ENST00000562534 LAMB2P55268 1798 aa20.47■□□□□ 0.87
USB1-206ENST00000562534 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
USB1-206ENST00000562534 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
USB1-206ENST00000562534 ANKRD44Q8N8A2 993 aa20.47■□□□□ 0.87
USB1-206ENST00000562534 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
USB1-206ENST00000562534 TAF7LQ5H9L4 462 aa20.46■□□□□ 0.87
USB1-206ENST00000562534 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
USB1-206ENST00000562534 SLX4Q8IY92 1834 aa20.46■□□□□ 0.87
USB1-206ENST00000562534 MYH3P11055 1940 aa20.44■□□□□ 0.86
USB1-206ENST00000562534 MTX1Q13505 466 aa20.43■□□□□ 0.86
USB1-206ENST00000562534 LDHAL6AQ6ZMR3 332 aa20.43■□□□□ 0.86
USB1-206ENST00000562534 MPNDQ8N594 471 aa20.43■□□□□ 0.86
USB1-206ENST00000562534 ZBTB40Q9NUA8 1239 aa20.43■□□□□ 0.86
USB1-206ENST00000562534 ARFGEF1Q9Y6D6 1849 aa20.42■□□□□ 0.86
USB1-206ENST00000562534 OLFM4Q6UX06 510 aa20.42■□□□□ 0.86
USB1-206ENST00000562534 PSMD1Q99460 953 aa20.42■□□□□ 0.86
USB1-206ENST00000562534 NSFL1CQ9UNZ2 370 aaKnown RBP20.42■□□□□ 0.86
USB1-206ENST00000562534 ATP8B2P98198 1209 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 FKBP4Q02790 459 aaKnown RBP eCLIP20.41■□□□□ 0.86
USB1-206ENST00000562534 DPP8Q6V1X1 898 aaPredicted RBP20.41■□□□□ 0.86
USB1-206ENST00000562534 SUPT20HQ8NEM7 779 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 ANKRD2Q9GZV1 360 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 VPS33BQ9H267 617 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 LTBP3Q9NS15 1303 aa20.41■□□□□ 0.86
USB1-206ENST00000562534 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
USB1-206ENST00000562534 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
USB1-206ENST00000562534 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
USB1-206ENST00000562534 PODXL2Q9NZ53 605 aa20.4■□□□□ 0.86
USB1-206ENST00000562534 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
USB1-206ENST00000562534 FBXO3Q9UK99 471 aa20.4■□□□□ 0.86
USB1-206ENST00000562534 NFKBIEO00221 500 aa20.39■□□□□ 0.85
USB1-206ENST00000562534 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.85
USB1-206ENST00000562534 TAF1P21675 1872 aa20.39■□□□□ 0.85
USB1-206ENST00000562534 LMNB1P20700 586 aa20.38■□□□□ 0.85
USB1-206ENST00000562534 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
USB1-206ENST00000562534 GPSM2P81274 684 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms