RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 AOC3Q16853 763 aa16.34■□□□□ 0.21
HERC2-202ENST00000562136 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
HERC2-202ENST00000562136 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
HERC2-202ENST00000562136 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
HERC2-202ENST00000562136 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
HERC2-202ENST00000562136 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
HERC2-202ENST00000562136 CXCL9Q07325 125 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
HERC2-202ENST00000562136 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 MPNDQ8N594 471 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.2
HERC2-202ENST00000562136 MBIPQ9NS73 344 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 GPRC5DQ9NZD1 345 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 COL4A1P02462 1669 aa16.33■□□□□ 0.2
HERC2-202ENST00000562136 DPP8Q6V1X1 898 aaPredicted RBP16.32■□□□□ 0.2
HERC2-202ENST00000562136 LAS1LQ9Y4W2 734 aaKnown RBP16.32■□□□□ 0.2
HERC2-202ENST00000562136 ADARB2Q9NS39 739 aaKnown RBP16.31■□□□□ 0.2
HERC2-202ENST00000562136 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
HERC2-202ENST00000562136 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
HERC2-202ENST00000562136 FOXN1O15353 648 aa16.3■□□□□ 0.2
HERC2-202ENST00000562136 DEFB115Q30KQ5 88 aa16.3■□□□□ 0.2
HERC2-202ENST00000562136 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
HERC2-202ENST00000562136 APAF1O14727 1248 aa16.29■□□□□ 0.2
HERC2-202ENST00000562136 GNAI1P63096 354 aa16.29■□□□□ 0.2
HERC2-202ENST00000562136 CST9Q5W186 159 aa16.29■□□□□ 0.2
HERC2-202ENST00000562136 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
HERC2-202ENST00000562136 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
HERC2-202ENST00000562136 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
HERC2-202ENST00000562136 GMPSP49915 693 aaPredicted RBP16.28■□□□□ 0.2
HERC2-202ENST00000562136 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
HERC2-202ENST00000562136 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
HERC2-202ENST00000562136 ZC3H15Q8WU90 426 aaKnown RBP16.28■□□□□ 0.2
HERC2-202ENST00000562136 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
HERC2-202ENST00000562136 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.2
HERC2-202ENST00000562136 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.2
HERC2-202ENST00000562136 TNIP1Q15025 636 aa16.27■□□□□ 0.2
HERC2-202ENST00000562136 SCN9AQ15858 1988 aa16.27■□□□□ 0.19
HERC2-202ENST00000562136 PSME4Q14997 1843 aa16.26■□□□□ 0.19
HERC2-202ENST00000562136 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
HERC2-202ENST00000562136 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
HERC2-202ENST00000562136 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■□□□□ 10.3
HERC2-202ENST00000562136 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
HERC2-202ENST00000562136 DPF2Q92785 391 aa16.26■□□□□ 0.19
HERC2-202ENST00000562136 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
HERC2-202ENST00000562136 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
HERC2-202ENST00000562136 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 POLLQ9UGP5 575 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 CACNA1FO60840 1977 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 MYH3P11055 1940 aa16.25■□□□□ 0.19
HERC2-202ENST00000562136 TRAF5O00463 557 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 RAD17O75943 681 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
HERC2-202ENST00000562136 MAP2K1Q02750 393 aaPredicted RBP16.24■□□□□ 0.19
HERC2-202ENST00000562136 WASHC4Q2M389 1173 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 HHIPL1Q96JK4 782 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
HERC2-202ENST00000562136 ZNF609O15014 1411 aa16.23■□□□□ 0.19
HERC2-202ENST00000562136 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 GPSM2P81274 684 aa16.23■□□□□ 0.19
HERC2-202ENST00000562136 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
HERC2-202ENST00000562136 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
HERC2-202ENST00000562136 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 CNOT7Q9UIV1 285 aaKnown RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 ABT1Q9ULW3 272 aaKnown RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 NSFL1CQ9UNZ2 370 aaKnown RBP16.23■□□□□ 0.19
HERC2-202ENST00000562136 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 TRPM4Q8TD43 1214 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 ZNF428Q96B54 188 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 AIDAQ96BJ3 306 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 CAPNS2Q96L46 248 aa16.22■□□□□ 0.19
HERC2-202ENST00000562136 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
HERC2-202ENST00000562136 PSMD14O00487 310 aa16.21■□□□□ 0.19
HERC2-202ENST00000562136 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
HERC2-202ENST00000562136 RPS12P25398 132 aaKnown RBP16.21■□□□□ 0.19
HERC2-202ENST00000562136 ECE1P42892 770 aa16.21■□□□□ 0.19
HERC2-202ENST00000562136 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
HERC2-202ENST00000562136 RTL9Q8NET4 1388 aa16.21■□□□□ 0.19
HERC2-202ENST00000562136 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
HERC2-202ENST00000562136 MAP2K2P36507 400 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 CDC37L1Q7L3B6 337 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 EYA3Q99504 573 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 MYD88Q99836 296 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
HERC2-202ENST00000562136 SEC31BQ9NQW1 1179 aa16.2■□□□□ 0.18
HERC2-202ENST00000562136 ZNF646O15015 1829 aaPredicted RBP16.19■□□□□ 0.18
HERC2-202ENST00000562136 H7C1D1 291 aa16.19■□□□□ 0.18
HERC2-202ENST00000562136 ECE2O60344 883 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms