RNA–Protein interactions for RNA: ENST00000562015.5

CNN2-203, Transcript of calponin 2, humanhuman

TSL 4

Gene CNN2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-203ENST00000562015 PSMD1Q99460 953 aa18.78■□□□□ 0.6
CNN2-203ENST00000562015 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
CNN2-203ENST00000562015 CELF1Q92879 486 aaKnown RBP18.77■□□□□ 0.6
CNN2-203ENST00000562015 ZNF541Q9H0D2 1346 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 F6X3S4 739 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
CNN2-203ENST00000562015 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 SEC31BQ9NQW1 1179 aa18.76■□□□□ 0.59
CNN2-203ENST00000562015 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 POTECB2RU33 542 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 DPP8Q6V1X1 898 aaPredicted RBP18.75■□□□□ 0.59
CNN2-203ENST00000562015 MPNDQ8N594 471 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 JDP2Q8WYK2 163 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 COL4A1P02462 1669 aa18.75■□□□□ 0.59
CNN2-203ENST00000562015 E9PSI1 815 aa18.74■□□□□ 0.59
CNN2-203ENST00000562015 PPIP5K2O43314 1243 aa18.74■□□□□ 0.59
CNN2-203ENST00000562015 PDE8AO60658 829 aa18.74■□□□□ 0.59
CNN2-203ENST00000562015 AOC3Q16853 763 aa18.74■□□□□ 0.59
CNN2-203ENST00000562015 COL4A5P29400 1685 aa18.73■□□□□ 0.59
CNN2-203ENST00000562015 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
CNN2-203ENST00000562015 GRIPAP1Q4V328 841 aa18.73■□□□□ 0.59
CNN2-203ENST00000562015 UBE3BQ7Z3V4 1068 aa18.73■□□□□ 0.59
CNN2-203ENST00000562015 RBM46Q8TBY0 533 aaKnown RBP18.73■□□□□ 0.59
CNN2-203ENST00000562015 MYH3P11055 1940 aa18.72■□□□□ 0.59
CNN2-203ENST00000562015 WDR90Q96KV7 1748 aa18.72■□□□□ 0.59
CNN2-203ENST00000562015 HSP90B1P14625 803 aaKnown RBP18.72■□□□□ 0.59
CNN2-203ENST00000562015 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
CNN2-203ENST00000562015 CCDC152Q4G0S7 254 aa18.72■□□□□ 0.59
CNN2-203ENST00000562015 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
CNN2-203ENST00000562015 FZD9O00144 591 aa18.71■□□□□ 0.59
CNN2-203ENST00000562015 HSPA6P17066 643 aa18.71■□□□□ 0.59
CNN2-203ENST00000562015 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
CNN2-203ENST00000562015 GCKRQ14397 625 aa18.71■□□□□ 0.59
CNN2-203ENST00000562015 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
CNN2-203ENST00000562015 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
CNN2-203ENST00000562015 H7C1W4 665 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 CTSWP56202 376 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 GPSM2P81274 684 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 CDHR2Q9BYE9 1310 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 SPEF2Q9C093 1822 aa18.7■□□□□ 0.58
CNN2-203ENST00000562015 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
CNN2-203ENST00000562015 TMC4Q7Z404 712 aa18.69■□□□□ 0.58
CNN2-203ENST00000562015 LINS1Q8NG48 757 aa18.69■□□□□ 0.58
CNN2-203ENST00000562015 GPR101Q96P66 508 aaPredicted RBP18.69■□□□□ 0.58
CNN2-203ENST00000562015 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
CNN2-203ENST00000562015 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
CNN2-203ENST00000562015 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 POTEJP0CG39 1038 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 GREM2Q9H772 168 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
CNN2-203ENST00000562015 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
CNN2-203ENST00000562015 BEND3Q5T5X7 828 aa18.67■□□□□ 0.58
CNN2-203ENST00000562015 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
CNN2-203ENST00000562015 MRPL50Q8N5N7 158 aaKnown RBP18.67■□□□□ 0.58
CNN2-203ENST00000562015 SMC1BQ8NDV3 1235 aa18.67■□□□□ 0.58
CNN2-203ENST00000562015 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
CNN2-203ENST00000562015 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
CNN2-203ENST00000562015 HTRA3P83110 453 aa18.66■□□□□ 0.58
CNN2-203ENST00000562015 FSTL1Q12841 308 aa18.66■□□□□ 0.58
CNN2-203ENST00000562015 SSH1Q8WYL5 1049 aa18.66■□□□□ 0.58
CNN2-203ENST00000562015 ANKIB1Q9P2G1 1089 aa18.66■□□□□ 0.58
CNN2-203ENST00000562015 SCN4AP35499 1836 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 IQCA1LA6NCM1 817 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 CASP7P55210 303 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 GPC2Q8N158 579 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
CNN2-203ENST00000562015 TAF1DQ9H5J8 278 aaPredicted RBP18.65■□□□□ 0.58
CNN2-203ENST00000562015 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 ZNRF3Q9ULT6 936 aa18.65■□□□□ 0.58
CNN2-203ENST00000562015 DUOX1Q9NRD9 1551 aa18.64■□□□□ 0.58
CNN2-203ENST00000562015 RAD17O75943 681 aa18.64■□□□□ 0.57
CNN2-203ENST00000562015 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
CNN2-203ENST00000562015 CDC5LQ99459 802 aaKnown RBP18.64■□□□□ 0.57
CNN2-203ENST00000562015 VPS33BQ9H267 617 aa18.64■□□□□ 0.57
CNN2-203ENST00000562015 CLEC11AQ9Y240 323 aa18.64■□□□□ 0.57
CNN2-203ENST00000562015 UFL1O94874 794 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 EPHX2P34913 555 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 CXCL9Q07325 125 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 TRMT2AQ8IZ69 625 aaKnown RBP18.63■□□□□ 0.57
CNN2-203ENST00000562015 TBC1D16Q8TBP0 767 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 CHMP3Q9Y3E7 222 aa18.63■□□□□ 0.57
CNN2-203ENST00000562015 ITGA6P23229 1130 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 EPS15P42566 896 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 APLP1P51693 650 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 PLA2G12BQ9BX93 195 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
CNN2-203ENST00000562015 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
CNN2-203ENST00000562015 WTIPA6NIX2 430 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms