RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
RAB40C-206ENST00000561781 ANAPC15P60006 121 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 CEP85Q6P2H3 762 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 FILIP1Q7Z7B0 1213 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 PSD3Q9NYI0 1048 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 KIF24Q5T7B8 1368 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 ESYT1Q9BSJ8 1104 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 UBXN6Q9BZV1 441 aa21.9■■□□□ 1.1
RAB40C-206ENST00000561781 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.1
RAB40C-206ENST00000561781 ERCC6LQ2NKX8 1250 aa21.89■■□□□ 1.1
RAB40C-206ENST00000561781 MNS1Q8NEH6 495 aa21.89■■□□□ 1.1
RAB40C-206ENST00000561781 TWISTNBQ3B726 338 aaPredicted RBP21.89■■□□□ 1.09
RAB40C-206ENST00000561781 EP400NLQ6ZTU2 488 aa21.89■■□□□ 1.09
RAB40C-206ENST00000561781 L2HGDHQ9H9P8 463 aa21.89■■□□□ 1.09
RAB40C-206ENST00000561781 CDC25BP30305 580 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 RPAP2Q8IXW5 612 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-206ENST00000561781 CLIP2Q9UDT6 1046 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 NFAT5O94916 1531 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 NPHP1O15259 732 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 IVLP07476 585 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 C8orf37Q96NL8 207 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 ANO2Q9NQ90 1003 aa21.88■■□□□ 1.09
RAB40C-206ENST00000561781 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
RAB40C-206ENST00000561781 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
RAB40C-206ENST00000561781 SATB1Q01826 763 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 SWT1Q5T5J6 900 aaKnown RBP21.87■■□□□ 1.09
RAB40C-206ENST00000561781 MBIPQ9NS73 344 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 SLIT3O75094 1523 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 PDE1AP54750 535 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 TSGA10IPQ3SY00 556 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 LUZP1Q86V48 1076 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 PACS2Q86VP3 889 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 LRRC8AQ8IWT6 810 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 SUGP1Q8IWZ8 645 aaKnown RBP21.87■■□□□ 1.09
RAB40C-206ENST00000561781 EXOC4Q96A65 974 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
RAB40C-206ENST00000561781 GSCP56915 257 aaPredicted RBP21.86■■□□□ 1.09
RAB40C-206ENST00000561781 CXorf56Q9H5V9 222 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 KCND1Q9NSA2 647 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 FAM83GA6ND36 823 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 OSBPL3Q9H4L5 887 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 PRDM11Q9NQV5 511 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
RAB40C-206ENST00000561781 USP27XA6NNY8 438 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 STX6O43752 255 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 ARHGAP29Q52LW3 1261 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 MRVI1Q9Y6F6 885 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 FCHSD2O94868 740 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 F13A1P00488 732 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 SYT1P21579 422 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 MAP3K11Q16584 847 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 C8orf58Q8NAV2 365 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 PPM1EQ8WY54 764 aa21.85■■□□□ 1.09
RAB40C-206ENST00000561781 AATKQ6ZMQ8 1374 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 OAS2P29728 719 aaKnown RBP21.84■■□□□ 1.09
RAB40C-206ENST00000561781 ACTN2P35609 894 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 GNAI1P63096 354 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 TYRO3Q06418 890 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 TSHZ3Q63HK5 1081 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 TDRD7Q8NHU6 1098 aaKnown RBP21.84■■□□□ 1.09
RAB40C-206ENST00000561781 MED4Q9NPJ6 270 aa21.84■■□□□ 1.09
RAB40C-206ENST00000561781 ANKRD26Q9UPS8 1709 aa21.83■■□□□ 1.09
RAB40C-206ENST00000561781 MEX3CQ5U5Q3 659 aaKnown RBP21.83■■□□□ 1.09
RAB40C-206ENST00000561781 CBX8Q9HC52 389 aa21.83■■□□□ 1.09
RAB40C-206ENST00000561781 SPATA31A6Q5VVP1 1343 aa21.82■■□□□ 1.08
RAB40C-206ENST00000561781 SART3Q15020 963 aaKnown RBP21.82■■□□□ 1.08
RAB40C-206ENST00000561781 ARHGEF25Q86VW2 580 aa21.82■■□□□ 1.08
RAB40C-206ENST00000561781 CCAR2Q8N163 923 aaKnown RBP21.82■■□□□ 1.08
RAB40C-206ENST00000561781 LTV1Q96GA3 475 aaPredicted RBP21.82■■□□□ 1.08
RAB40C-206ENST00000561781 SKILP12757 684 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 CCDC144BQ3MJ40 725 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 LEKR1Q6ZMV7 388 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 CCDC144CPQ8IYA2 1237 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 IL17RAQ96F46 866 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 USP54Q70EL1 1684 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 DNM1Q05193 864 aaKnown RBP21.81■■□□□ 1.08
RAB40C-206ENST00000561781 KRT24Q2M2I5 525 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 HSP90AB2PQ58FF8 381 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 MCTP2Q6DN12 878 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 EGFL6Q8IUX8 553 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 REXO1L1PQ8IX06 675 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 KCNH5Q8NCM2 988 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 PHACTR3Q96KR7 559 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
RAB40C-206ENST00000561781 TUBB4AP04350 444 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 ZNF853P0CG23 659 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 LTN1O94822 1766 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 TPM1P09493 284 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 CASTP20810 708 aaKnown RBP21.8■■□□□ 1.08
RAB40C-206ENST00000561781 SMC1AQ14683 1233 aaKnown RBP21.8■■□□□ 1.08
RAB40C-206ENST00000561781 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 NUP62CLQ9H1M0 184 aa21.8■■□□□ 1.08
RAB40C-206ENST00000561781 CEP89Q96ST8 783 aa21.79■■□□□ 1.08
RAB40C-206ENST00000561781 CHMLP26374 656 aa21.79■■□□□ 1.08
RAB40C-206ENST00000561781 AMPHP49418 695 aa21.79■■□□□ 1.08
RAB40C-206ENST00000561781 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
RAB40C-206ENST00000561781 UBXN4Q92575 508 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms