RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 GTF2E1P29083 439 aaPredicted RBP24.21■■□□□ 1.47
IRF9-215ENST00000561415 PTPN12Q05209 780 aaKnown RBP24.21■■□□□ 1.47
IRF9-215ENST00000561415 FAM161AQ3B820 660 aa24.21■■□□□ 1.47
IRF9-215ENST00000561415 SLC10A5Q5PT55 438 aa24.21■■□□□ 1.47
IRF9-215ENST00000561415 KLHDC4Q8TBB5 520 aa24.2■■□□□ 1.46
IRF9-215ENST00000561415 LNPKQ9C0E8 428 aa24.2■■□□□ 1.46
IRF9-215ENST00000561415 APBB1O00213 710 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 DDR1Q08345 913 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 CCDC57Q2TAC2 916 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 CNBD1Q8NA66 436 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 LRRCC1Q9C099 1032 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 GREM2Q9H772 168 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 POLRMTO00411 1230 aaKnown RBP24.19■■□□□ 1.46
IRF9-215ENST00000561415 RTL9Q8NET4 1388 aa24.19■■□□□ 1.46
IRF9-215ENST00000561415 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
IRF9-215ENST00000561415 SERPINB2P05120 415 aa24.18■■□□□ 1.46
IRF9-215ENST00000561415 IFIT5Q13325 482 aaKnown RBP24.18■■□□□ 1.46
IRF9-215ENST00000561415 RIC1Q4ADV7 1423 aa24.18■■□□□ 1.46
IRF9-215ENST00000561415 CCDC85AQ96PX6 553 aaPredicted RBP24.18■■□□□ 1.46
IRF9-215ENST00000561415 ZBTB47Q9UFB7 747 aaPredicted RBP24.18■■□□□ 1.46
IRF9-215ENST00000561415 ERC1Q8IUD2 1116 aa24.17■■□□□ 1.46
IRF9-215ENST00000561415 TNRC6CQ9HCJ0 1690 aaKnown RBP24.17■■□□□ 1.46
IRF9-215ENST00000561415 NPHP1O15259 732 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 ITGA6P23229 1130 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 PDE4AP27815 886 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 G3BP1Q13283 466 aaKnown RBP eCLIP24.16■■□□□ 1.46
IRF9-215ENST00000561415 OS9Q13438 667 aaPredicted RBP24.16■■□□□ 1.46
IRF9-215ENST00000561415 CCDC152Q4G0S7 254 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 KIF1BPQ96EK5 621 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 SIL1Q9H173 461 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 RGS3P49796 1198 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 SF3B3Q15393 1217 aaKnown RBP24.16■■□□□ 1.46
IRF9-215ENST00000561415 RHPN1Q8TCX5 695 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 LRP5O75197 1615 aa24.16■■□□□ 1.46
IRF9-215ENST00000561415 SMARCA5O60264 1052 aaPredicted RBP24.15■■□□□ 1.46
IRF9-215ENST00000561415 ANKRD18BA2A2Z9 1011 aa24.14■■□□□ 1.46
IRF9-215ENST00000561415 C3orf67Q6ZVT6 689 aa24.14■■□□□ 1.46
IRF9-215ENST00000561415 MMP10P09238 476 aa24.14■■□□□ 1.45
IRF9-215ENST00000561415 MSL1Q68DK7 614 aa24.14■■□□□ 1.45
IRF9-215ENST00000561415 ZNF594Q96JF6 807 aaPredicted RBP24.14■■□□□ 1.45
IRF9-215ENST00000561415 NLRP3Q96P20 1036 aa24.14■■□□□ 1.45
IRF9-215ENST00000561415 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
IRF9-215ENST00000561415 SASH1O94885 1247 aa24.13■■□□□ 1.45
IRF9-215ENST00000561415 ST5P78524 1137 aa24.13■■□□□ 1.45
IRF9-215ENST00000561415 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
IRF9-215ENST00000561415 CCDC24Q8N4L8 307 aa24.13■■□□□ 1.45
IRF9-215ENST00000561415 CIAO1O76071 339 aa24.12■■□□□ 1.45
IRF9-215ENST00000561415 TAF7LQ5H9L4 462 aa24.12■■□□□ 1.45
IRF9-215ENST00000561415 EYA2O00167 538 aa24.11■■□□□ 1.45
IRF9-215ENST00000561415 PDGFDQ9GZP0 370 aaPredicted RBP24.11■■□□□ 1.45
IRF9-215ENST00000561415 ATG9AQ7Z3C6 839 aa24.11■■□□□ 1.45
IRF9-215ENST00000561415 IL1RAPL2Q9NP60 686 aa24.11■■□□□ 1.45
IRF9-215ENST00000561415 IL15P40933 162 aaPredicted RBP24.1■■□□□ 1.45
IRF9-215ENST00000561415 SLC16A10Q8TF71 515 aa24.1■■□□□ 1.45
IRF9-215ENST00000561415 PARP3Q9Y6F1 533 aa24.1■■□□□ 1.45
IRF9-215ENST00000561415 C16orf71Q8IYS4 520 aaPredicted RBP24.09■■□□□ 1.45
IRF9-215ENST00000561415 SEC31BQ9NQW1 1179 aa24.09■■□□□ 1.45
IRF9-215ENST00000561415 ANKRD31Q8N7Z5 1873 aa24.09■■□□□ 1.45
IRF9-215ENST00000561415 SPEF2Q9C093 1822 aa24.09■■□□□ 1.45
IRF9-215ENST00000561415 LRRC24Q50LG9 513 aa24.08■■□□□ 1.45
IRF9-215ENST00000561415 PUS3Q9BZE2 481 aaKnown RBP24.08■■□□□ 1.44
IRF9-215ENST00000561415 TAF1P21675 1872 aa24.08■■□□□ 1.44
IRF9-215ENST00000561415 COL4A1P02462 1669 aa24.07■■□□□ 1.44
IRF9-215ENST00000561415 LDHAL6AQ6ZMR3 332 aa24.07■■□□□ 1.44
IRF9-215ENST00000561415 CLASRPQ8N2M8 674 aaKnown RBP24.07■■□□□ 1.44
IRF9-215ENST00000561415 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
IRF9-215ENST00000561415 CDC5LQ99459 802 aaKnown RBP24.07■■□□□ 1.44
IRF9-215ENST00000561415 BCL11AQ9H165 835 aa24.07■■□□□ 1.44
IRF9-215ENST00000561415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.07■■□□□ 1.44
IRF9-215ENST00000561415 SALL3Q9BXA9 1300 aa24.07■■□□□ 1.44
IRF9-215ENST00000561415 PLEKHM2Q8IWE5 1019 aa24.06■■□□□ 1.44
IRF9-215ENST00000561415 TFCP2Q12800 502 aa24.06■■□□□ 1.44
IRF9-215ENST00000561415 CRY2Q49AN0 593 aa24.06■■□□□ 1.44
IRF9-215ENST00000561415 RIPOR2Q9Y4F9 1068 aa24.06■■□□□ 1.44
IRF9-215ENST00000561415 KLRG2A4D1S0 409 aaPredicted RBP24.04■■□□□ 1.44
IRF9-215ENST00000561415 IGHMBP2P38935 993 aaKnown RBP24.04■■□□□ 1.44
IRF9-215ENST00000561415 BRIP1Q9BX63 1249 aa24.04■■□□□ 1.44
IRF9-215ENST00000561415 CNNM1Q9NRU3 951 aa24.04■■□□□ 1.44
IRF9-215ENST00000561415 MPHOSPH8Q99549 860 aa24.03■■□□□ 1.44
IRF9-215ENST00000561415 MX1P20591 662 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 TNNI3KQ59H18 835 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
IRF9-215ENST00000561415 AACSQ86V21 672 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 ANKRD18AQ8IVF6 992 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 EAF2Q96CJ1 260 aaPredicted RBP24.02■■□□□ 1.44
IRF9-215ENST00000561415 OSBPL3Q9H4L5 887 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 GPR108Q9NPR9 543 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 CEP126Q9P2H0 1117 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 FPGT-TNNI3KV9GXZ4 949 aa24.02■■□□□ 1.44
IRF9-215ENST00000561415 PDE1AP54750 535 aa24.01■■□□□ 1.43
IRF9-215ENST00000561415 R3HDM1Q15032 1099 aaKnown RBP24.01■■□□□ 1.43
IRF9-215ENST00000561415 CELF1Q92879 486 aaKnown RBP24.01■■□□□ 1.43
IRF9-215ENST00000561415 STAP2Q9UGK3 403 aa24.01■■□□□ 1.43
IRF9-215ENST00000561415 MROH5Q6ZUA9 1318 aa24.01■■□□□ 1.43
IRF9-215ENST00000561415 ZNF609O15014 1411 aa24■■□□□ 1.43
IRF9-215ENST00000561415 A0A1B0GUL6 1792 aa24■■□□□ 1.43
IRF9-215ENST00000561415 IFIT2P09913 472 aaKnown RBP24■■□□□ 1.43
IRF9-215ENST00000561415 METTL24Q5JXM2 366 aa24■■□□□ 1.43
IRF9-215ENST00000561415 VGLL2Q8N8G2 317 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms