RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 DNAAF4Q8WXU2 420 aa9.42□□□□□ -0.9
TPM1-231ENST00000561395 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
TPM1-231ENST00000561395 CARMIL3Q8ND23 1372 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 PI4KAP2A4QPH2 592 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 TM4SF1P30408 202 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 ERFEQ4G0M1 354 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 SMC5Q8IY18 1101 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 PI4KAP1Q8N8J0 262 aa9.41□□□□□ -0.9
TPM1-231ENST00000561395 IBTKQ9P2D0 1353 aaPredicted RBP9.4□□□□□ -0.9
TPM1-231ENST00000561395 PTCD1O75127 700 aaKnown RBP9.4□□□□□ -0.9
TPM1-231ENST00000561395 DDNO94850 711 aaPredicted RBP9.4□□□□□ -0.9
TPM1-231ENST00000561395 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
TPM1-231ENST00000561395 GNAI3P08754 354 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 MYL6BP14649 208 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 BEND3Q5T5X7 828 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 CEP85Q6P2H3 762 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 KSR2Q6VAB6 950 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 LDHDQ86WU2 507 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 PDZRN3Q9UPQ7 1066 aa9.4□□□□□ -0.9
TPM1-231ENST00000561395 GNAI2P04899 355 aa9.39□□□□□ -0.91
TPM1-231ENST00000561395 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
TPM1-231ENST00000561395 MAP2K1Q02750 393 aaPredicted RBP9.39□□□□□ -0.91
TPM1-231ENST00000561395 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
TPM1-231ENST00000561395 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
TPM1-231ENST00000561395 XAGE3Q8WTP9 111 aa9.39□□□□□ -0.91
TPM1-231ENST00000561395 MAP3K2Q9Y2U5 619 aa9.39□□□□□ -0.91
TPM1-231ENST00000561395 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
TPM1-231ENST00000561395 BCORQ6W2J9 1755 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 RASSF10A6NK89 507 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 ZPR1O75312 459 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 ITGBL1O95965 494 aaPredicted RBP9.38□□□□□ -0.91
TPM1-231ENST00000561395 RGS3P49796 1198 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
TPM1-231ENST00000561395 NFIXQ14938 502 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 DEFB115Q30KQ5 88 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
TPM1-231ENST00000561395 NBPF15Q8N660 670 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 GCC1Q96CN9 775 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 USP44Q9H0E7 712 aa9.38□□□□□ -0.91
TPM1-231ENST00000561395 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 H0YIN7 160 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 C21orf2O43822 256 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 SERPINB2P05120 415 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 UBTFL1P0CB47 393 aaPredicted RBP9.37□□□□□ -0.91
TPM1-231ENST00000561395 PIP4K2AP48426 406 aaPredicted RBP9.37□□□□□ -0.91
TPM1-231ENST00000561395 NUCB1Q02818 461 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
TPM1-231ENST00000561395 COPS6Q7L5N1 327 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 LINS1Q8NG48 757 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 TEX13AQ9BXU3 409 aaPredicted RBP9.37□□□□□ -0.91
TPM1-231ENST00000561395 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
TPM1-231ENST00000561395 COL15A1P39059 1388 aa9.37□□□□□ -0.91
TPM1-231ENST00000561395 HMMRO75330 724 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 A1BGP04217 495 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 EAPPQ56P03 285 aaPredicted RBP9.36□□□□□ -0.91
TPM1-231ENST00000561395 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
TPM1-231ENST00000561395 METTL22Q9BUU2 404 aaPredicted RBP9.36□□□□□ -0.91
TPM1-231ENST00000561395 TAOK3Q9H2K8 898 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
TPM1-231ENST00000561395 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
TPM1-231ENST00000561395 UTYO14607 1347 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 ANKRD36CQ5JPF3 1778 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 STARD3NLO95772 234 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 IGKV5-2P06315 115 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 PDE4AP27815 886 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 NEXNQ0ZGT2 675 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 CWF19L2Q2TBE0 894 aaKnown RBP9.35□□□□□ -0.91
TPM1-231ENST00000561395 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 CHD1LQ86WJ1 897 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 PLBD2Q8NHP8 589 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.917e-8■■□□□ 14.3
TPM1-231ENST00000561395 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 ABT1Q9ULW3 272 aaKnown RBP9.35□□□□□ -0.91
TPM1-231ENST00000561395 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
TPM1-231ENST00000561395 NEURL1BA8MQ27 555 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 GRM8O00222 908 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 NBPF7P0C2Y1 421 aaPredicted RBP9.34□□□□□ -0.91
TPM1-231ENST00000561395 CYP19A1P11511 503 aaPredicted RBP9.34□□□□□ -0.91
TPM1-231ENST00000561395 ATP8B2P98198 1209 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 MYD88Q99836 296 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 MCOLN1Q9GZU1 580 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 NARFQ9UHQ1 456 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
TPM1-231ENST00000561395 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
TPM1-231ENST00000561395 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
TPM1-231ENST00000561395 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
TPM1-231ENST00000561395 BACH2Q9BYV9 841 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms