RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 MAP3K12Q12852 859 aa19.34■□□□□ 0.69
AP4E1-205ENST00000561393 OSBPL3Q9H4L5 887 aa19.34■□□□□ 0.69
AP4E1-205ENST00000561393 ZNF213O14771 459 aa19.33■□□□□ 0.69
AP4E1-205ENST00000561393 NRDCO43847 1150 aa19.33■□□□□ 0.69
AP4E1-205ENST00000561393 GUCY1B3Q02153 619 aa19.33■□□□□ 0.68
AP4E1-205ENST00000561393 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.68
AP4E1-205ENST00000561393 FAM98CQ17RN3 349 aaKnown RBP19.33■□□□□ 0.68
AP4E1-205ENST00000561393 RAB11FIP4Q86YS3 637 aa19.33■□□□□ 0.68
AP4E1-205ENST00000561393 NAPBQ9H115 298 aa19.33■□□□□ 0.68
AP4E1-205ENST00000561393 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
AP4E1-205ENST00000561393 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 HMG20BQ9P0W2 317 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 RAD21O60216 631 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 TULP1O00294 542 aaPredicted RBP19.32■□□□□ 0.68
AP4E1-205ENST00000561393 TCIRG1Q13488 830 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 NUP133Q8WUM0 1156 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 SPATA32Q96LK8 384 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
AP4E1-205ENST00000561393 SLIT1O75093 1534 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 MINDY4BA8MYZ0 360 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 SMARCC1Q92922 1105 aaPredicted RBP19.31■□□□□ 0.68
AP4E1-205ENST00000561393 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 RAD50Q92878 1312 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 ITGA6P23229 1130 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 CAVIN4Q5BKX8 364 aa19.31■□□□□ 0.68
AP4E1-205ENST00000561393 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
AP4E1-205ENST00000561393 TLR7Q9NYK1 1049 aaKnown RBP19.31■□□□□ 0.68
AP4E1-205ENST00000561393 RBM27Q9P2N5 1060 aaKnown RBP19.31■□□□□ 0.68
AP4E1-205ENST00000561393 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
AP4E1-205ENST00000561393 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
AP4E1-205ENST00000561393 MPNDQ8N594 471 aa19.3■□□□□ 0.68
AP4E1-205ENST00000561393 UTP14AQ9BVJ6 771 aaKnown RBP19.3■□□□□ 0.68
AP4E1-205ENST00000561393 NRKQ7Z2Y5 1582 aa19.3■□□□□ 0.68
AP4E1-205ENST00000561393 SLC9C2Q5TAH2 1124 aa19.3■□□□□ 0.68
AP4E1-205ENST00000561393 HMGB1P09429 215 aaKnown RBP19.29■□□□□ 0.68
AP4E1-205ENST00000561393 STK38Q15208 465 aa19.29■□□□□ 0.68
AP4E1-205ENST00000561393 CCDC34Q96HJ3 373 aa19.29■□□□□ 0.68
AP4E1-205ENST00000561393 CHST3Q7LGC8 479 aa19.29■□□□□ 0.68
AP4E1-205ENST00000561393 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
AP4E1-205ENST00000561393 ME1P48163 572 aa19.29■□□□□ 0.68
AP4E1-205ENST00000561393 CCDC69A6NI79 296 aa19.29■□□□□ 0.68
AP4E1-205ENST00000561393 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
AP4E1-205ENST00000561393 POLA2Q14181 598 aa19.28■□□□□ 0.68
AP4E1-205ENST00000561393 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
AP4E1-205ENST00000561393 HSPA4P34932 840 aa19.28■□□□□ 0.68
AP4E1-205ENST00000561393 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
AP4E1-205ENST00000561393 TPM4P67936 248 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 ERBB4Q15303 1308 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 PTH1RQ03431 593 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 KLHL40Q2TBA0 621 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 EPHA10Q5JZY3 1008 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 PIGBQ92521 554 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 CDCA7Q9BWT1 371 aaPredicted RBP19.27■□□□□ 0.68
AP4E1-205ENST00000561393 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
AP4E1-205ENST00000561393 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 NCAPD2Q15021 1401 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 KINO60870 393 aaKnown RBP19.27■□□□□ 0.67
AP4E1-205ENST00000561393 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.67
AP4E1-205ENST00000561393 CREBRFQ8IUR6 639 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.67
AP4E1-205ENST00000561393 UBAC1Q9BSL1 405 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 ZBTB1Q9Y2K1 713 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.67
AP4E1-205ENST00000561393 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 Q6ZUG5 572 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 RNF113AO15541 343 aaKnown RBP19.26■□□□□ 0.67
AP4E1-205ENST00000561393 XAGE2Q96GT9 111 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 SASH1O94885 1247 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 ZFYP08048 801 aaPredicted RBP19.26■□□□□ 0.67
AP4E1-205ENST00000561393 AK7Q96M32 723 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 ADGRB2O60241 1585 aa19.26■□□□□ 0.67
AP4E1-205ENST00000561393 ADCY9O60503 1353 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 GOLGA8BA8MQT2 603 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 RFC4P35249 363 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 SHPRHQ149N8 1683 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 UQCRFS1P1P0C7P4 283 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 ZSCAN22P10073 491 aaPredicted RBP19.25■□□□□ 0.67
AP4E1-205ENST00000561393 RUFY3Q7L099 469 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
AP4E1-205ENST00000561393 ANKRD18AQ8IVF6 992 aa19.25■□□□□ 0.67
AP4E1-205ENST00000561393 PUS3Q9BZE2 481 aaKnown RBP19.25■□□□□ 0.67
AP4E1-205ENST00000561393 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 SEC62Q99442 399 aaKnown RBP19.24■□□□□ 0.67
AP4E1-205ENST00000561393 CCDC87Q9NVE4 849 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 SLC27A2O14975 620 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 ATP5JP18859 108 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 TNMDQ9H2S6 317 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 CAMK4Q16566 473 aa19.24■□□□□ 0.67
AP4E1-205ENST00000561393 VPS53Q5VIR6 699 aa19.23■□□□□ 0.67
AP4E1-205ENST00000561393 CCDC144CPQ8IYA2 1237 aa19.23■□□□□ 0.67
AP4E1-205ENST00000561393 TRIM22Q8IYM9 498 aa19.23■□□□□ 0.67
AP4E1-205ENST00000561393 CFAP45Q9UL16 551 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms