RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 GRAPLQ8TC17 118 aaPredicted RBP17.23■□□□□ 0.35
SHF-210ENST00000561239 NEURL1BA8MQ27 555 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 TOMM70O94826 608 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
SHF-210ENST00000561239 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 LINS1Q8NG48 757 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
SHF-210ENST00000561239 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 F6X3S4 739 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
SHF-210ENST00000561239 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
SHF-210ENST00000561239 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 RRAGCQ9HB90 399 aa17.21■□□□□ 0.35
SHF-210ENST00000561239 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
SHF-210ENST00000561239 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
SHF-210ENST00000561239 PDE8AO60658 829 aa17.2■□□□□ 0.34
SHF-210ENST00000561239 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
SHF-210ENST00000561239 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
SHF-210ENST00000561239 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
SHF-210ENST00000561239 DDX60Q8IY21 1712 aaKnown RBP17.2■□□□□ 0.34
SHF-210ENST00000561239 LAMB2P55268 1798 aa17.2■□□□□ 0.34
SHF-210ENST00000561239 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
SHF-210ENST00000561239 GCKRQ14397 625 aa17.19■□□□□ 0.34
SHF-210ENST00000561239 H7C1W4 665 aa17.18■□□□□ 0.34
SHF-210ENST00000561239 CASP7P55210 303 aa17.18■□□□□ 0.34
SHF-210ENST00000561239 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
SHF-210ENST00000561239 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
SHF-210ENST00000561239 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
SHF-210ENST00000561239 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
SHF-210ENST00000561239 BCAR3O75815 825 aa17.17■□□□□ 0.34
SHF-210ENST00000561239 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
SHF-210ENST00000561239 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
SHF-210ENST00000561239 MPNDQ8N594 471 aa17.17■□□□□ 0.34
SHF-210ENST00000561239 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
SHF-210ENST00000561239 IQCA1LA6NCM1 817 aa17.16■□□□□ 0.34
SHF-210ENST00000561239 ALDH1L1O75891 902 aa17.16■□□□□ 0.34
SHF-210ENST00000561239 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
SHF-210ENST00000561239 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
SHF-210ENST00000561239 FZD9O00144 591 aa17.15■□□□□ 0.34
SHF-210ENST00000561239 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
SHF-210ENST00000561239 EIF6P56537 245 aaKnown RBP17.15■□□□□ 0.34
SHF-210ENST00000561239 FSTL1Q12841 308 aa17.15■□□□□ 0.34
SHF-210ENST00000561239 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.33
SHF-210ENST00000561239 CTSWP56202 376 aa17.14■□□□□ 0.33
SHF-210ENST00000561239 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
SHF-210ENST00000561239 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
SHF-210ENST00000561239 CDC5LQ99459 802 aaKnown RBP17.14■□□□□ 0.33
SHF-210ENST00000561239 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
SHF-210ENST00000561239 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
SHF-210ENST00000561239 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
SHF-210ENST00000561239 UTYO14607 1347 aa17.14■□□□□ 0.33
SHF-210ENST00000561239 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
SHF-210ENST00000561239 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
SHF-210ENST00000561239 GPC2Q8N158 579 aa17.13■□□□□ 0.33
SHF-210ENST00000561239 SMC1BQ8NDV3 1235 aa17.13■□□□□ 0.33
SHF-210ENST00000561239 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SHF-210ENST00000561239 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
SHF-210ENST00000561239 HSPA6P17066 643 aa17.12■□□□□ 0.33
SHF-210ENST00000561239 SLC4A10Q6U841 1118 aa17.12■□□□□ 0.33
SHF-210ENST00000561239 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
SHF-210ENST00000561239 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
SHF-210ENST00000561239 GRM8O00222 908 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 TRIM27P14373 513 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 AOC3Q16853 763 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 TTLL11Q8NHH1 800 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 EYA3Q99504 573 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
SHF-210ENST00000561239 COL4A1P02462 1669 aa17.1■□□□□ 0.33
SHF-210ENST00000561239 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
SHF-210ENST00000561239 INTS3Q68E01 1043 aaKnown RBP17.1■□□□□ 0.33
SHF-210ENST00000561239 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
SHF-210ENST00000561239 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
SHF-210ENST00000561239 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
SHF-210ENST00000561239 POTECB2RU33 542 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 C6orf229H3BNL8 230 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 CSF1RP07333 972 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
SHF-210ENST00000561239 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
SHF-210ENST00000561239 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
SHF-210ENST00000561239 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 HACL1Q9UJ83 578 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
SHF-210ENST00000561239 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.32
SHF-210ENST00000561239 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
SHF-210ENST00000561239 KAZALD1Q96I82 304 aa17.08■□□□□ 0.32
SHF-210ENST00000561239 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
SHF-210ENST00000561239 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
SHF-210ENST00000561239 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
SHF-210ENST00000561239 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms