RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 USP44Q9H0E7 712 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 UTRNP46939 3433 aa12.17□□□□□ -0.46
RABGGTA-221ENST00000561055 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 BBOX1O75936 387 aa12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 YY1P25490 414 aa12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 TTLL11Q8NHH1 800 aa12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 BCS1LQ9Y276 419 aa12.16□□□□□ -0.46
RABGGTA-221ENST00000561055 LTBP1Q14766 1721 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 SNED1Q8TER0 1413 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 MS4A1P11836 297 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 CTSWP56202 376 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 FOXO4P98177 505 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 TMC4Q7Z404 712 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 COL4A1P02462 1669 aa12.15□□□□□ -0.46
RABGGTA-221ENST00000561055 GRAPQ13588 217 aa12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 TNNQ9UQP3 1299 aa12.14□□□□□ -0.47
RABGGTA-221ENST00000561055 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-221ENST00000561055 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
RABGGTA-221ENST00000561055 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
RABGGTA-221ENST00000561055 ATP6V0A2Q9Y487 856 aa12.13□□□□□ -0.47
RABGGTA-221ENST00000561055 LTBP3Q9NS15 1303 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 RLBP1P12271 317 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 EPHA10Q5JZY3 1008 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
RABGGTA-221ENST00000561055 PPEF1O14829 653 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 C21orf2O43822 256 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 GNAI3P08754 354 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 FTSJ3Q8IY81 847 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 RTKN2Q8IZC4 609 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 GREM2Q9H772 168 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 WWC3Q9ULE0 1092 aa12.11□□□□□ -0.47
RABGGTA-221ENST00000561055 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 ARHGAP27Q6ZUM4 889 aa12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 MEIS3Q99687 375 aa12.1□□□□□ -0.47
RABGGTA-221ENST00000561055 TIAM2Q8IVF5 1701 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 NFKBIEO00221 500 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 ITGA6P23229 1130 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 PSMD1Q99460 953 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 BICC1Q9H694 974 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 BSDC1Q9NW68 430 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 PSME4Q14997 1843 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
RABGGTA-221ENST00000561055 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 PLIN1O60240 522 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 IFIT5Q13325 482 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 MTX1Q13505 466 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 MVPQ14764 893 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
RABGGTA-221ENST00000561055 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-221ENST00000561055 GNAI2P04899 355 aa12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 IGHMBP2P38935 993 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 MPNDQ8N594 471 aa12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 DDX19BQ9UMR2 479 aa12.06□□□□□ -0.48
RABGGTA-221ENST00000561055 LMNB1P20700 586 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 PRELPP51888 382 aa12.05□□□□□ -0.48
RABGGTA-221ENST00000561055 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms